MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-60

Family name OCT-NOVEL-60 (all species)
Seed UUGGACU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Ovu-Novel-60 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ416390: 327922-327985 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAUCGGAUUUGAGAGUGUAGUUAUUGCAUGGGAAAUGUGAAGUUCAAGGAGUAUAUAGUAAGACGUUUCUUUGGACUUCGUCAUUUUCCAUUUUAUAUCUGCUCUGUCAUUGUAACUCUGGG
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Structure
        10          20        30         40        50        60 
UUAAUCGGAUUUGAGAGU--    U   UGC          -|            GUAUAUAG 
                    GUAG UAU   AUGGGAAAUG UGAAGUUCAAGGA        \
                    CGUC AUA   UACCUUUUAC GCUUCAGGUUUCU        U
GGGUCUCAAUGUUACUGUCU    U   UUU          U^            UUGCAGAA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Star sequence

Obi-Novel-60_5p*

mirBase accessionNone
Sequence
0- UGGGAAAUGUGAAGUUCAAGGA -22
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Mature sequence

Obi-Novel-60_3p

mirBase accessionNone
Sequence
41- UUUGGACUUCGUCAUUUUCCAUU -64
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