| MirGeneDB ID | Obi-Novel-6 |
|---|
| Family name |
CEP-NOVEL-6 (all species) |
|---|
| Seed |
GAACCAU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-6
Npo-Novel-6
Ovu-Novel-6
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ421281: 361550-361609 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUCAGUGGCCGGAUAACAGCCAUCAUGUGGUGAACCAUGGUUAAUGAACAUUGAUUACUUACUUUCCAAUGGUCUUGACCAUGAUUUACCUUAUGAGAGUAAAACUGAUCUCACGACAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCAGUGGCCGGAUAACA--| CA U C U A AUUACU
GC UCAUG GGUGAA CAUGGUUAA GA CAUUG \
UG AGUAU CCAUUU GUACCAGUU CU GUAAC U
AAACAGCACUCUAGUCAAAA^ AG U A - G CUUUCA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAACCAUGGUUAAUGAACAUUG -23
Get sequence
|
|---|
| Star sequence |
Obi-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AUGGUCUUGACCAUGAUUUACC -60
Get sequence
|
|---|
