| MirGeneDB ID | Obi-Novel-50 |
|---|
| Family name |
COL-NOVEL-50 (all species) |
|---|
| Seed |
GUCUCAU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-50
Ovu-Novel-50
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ423887: 292361-292418 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUAAAGAUAUCACUCAUGCUGAUUUCUAUAGUCUCAUGUAUUGGAAUGUUGCCUCUAUUUUACCAACAUUCCAGUGCAUGAGUCAUAGAGAACAGUUCAAGGCAUCAUAAUAGUCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUAAAGAUAUCACUCAU---| A AGU CCUCU
GCUG UUUCUAU CUCAUGUAUUGGAAUGUUG A
UGAC AGAGAUA GAGUACGUGACCUUACAAC U
AACUGAUAAUACUACGGAACU^ A CU- CAUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-50_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUCUCAUGUAUUGGAAUGUUG -22
Get sequence
|
|---|
| Star sequence |
Obi-Novel-50_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- ACAUUCCAGUGCAUGAGUCAUA -58
Get sequence
|
|---|
