| MirGeneDB ID | Obi-Novel-5 |
|---|
| Family name |
CEP-NOVEL-5 (all species) |
|---|
| Seed |
GUUCCUA |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-5
Npo-Novel-5
Ovu-Novel-5
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ418263: 1045148-1045207 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAUAUUCUGUUACCAUACUUUUCUAUCAUAUUCGGUCCUUUUUGGGACCUCGUUUCAAUCUAACGGAAGUUCCUAGAUGGACUGAGAAUGGUAGCUAAGUUCGACCACCAUAGCACAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUAUUCUGUUACCAU--| UU A U U C GUUUCA
ACUU CUAUCAU UUCGGUCC UUU GGGAC UC A
UGAA GAUGGUA GAGUCAGG AGA CCUUG AG U
UUACACGAUACCACCAGCU^ UC A U U A GCAAUC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-5_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUUCGGUCCUUUUUGGGACCUC -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-5_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AGUUCCUAGAUGGACUGAGAAU -60
Get sequence
|
|---|
