MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-30

Family name COL-NOVEL-30 (all species)
Seed GGAACCA
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Novel-30  Ovu-Novel-30 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ417544: 781227-781286 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACAAAAUGAGAUGUGUUGCGACAGGGGCACGGAACCAACGCUGACUUACCUGGAGAUUUCUGAGAGGGUAAGUCAAUGCUGGCUUCGCGCCCAUGGAGCCAUAACCUUCAUAGGAAAAU
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Structure
        10          20        30        40        50         
UACAAAAUGAGAUGUGUU--| GA  G    A    A   A  C          GGAGAU 
                    GC  CA GGGC CGGA CCA CG UGACUUACCU      U
                    CG  GU CCCG GCUU GGU GU ACUGAAUGGG      U
UAAAAGGAUACUUCCAAUAC^ AG  A    C    C   C  A          AGAGUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Novel-30_5p

mirBase accessionNone
Sequence
0- CGGAACCAACGCUGACUUACCU -22
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Star sequence

Obi-Novel-30_3p*

mirBase accessionNone
Sequence
38- GUAAGUCAAUGCUGGCUUCGCG -60
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