| MirGeneDB ID | Obi-Novel-24-v2 |
|---|
| Family name |
COL-NOVEL-24 (all species) |
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| Seed |
UUUAGUG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-24-v1
Obi-Novel-24-v3
|
|---|
| Orthologues |
Esc-Novel-24-v2
Ovu-Novel-24-v2
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ432289: 1359-1420 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAGAAGAUUAGAGUAC-- CGA UG A -| CAUUUC
AAUUC UCGUUAGC GUUAUGUG ACUAAG AUU \
UUAAG AGUAGUCG CAAUACAC UGAUUU UAA C
CUAAAGGCUCUGCUAUUGU AUA GU G A^ ACUAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-24-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCUGGUUAUGUGAACUAAGAUU -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-24-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
39- AUUUAGUGCACAUAACUGGCUGA -62
Get sequence
|
|---|
