| MirGeneDB ID | Obi-Novel-2 |
|---|
| Family name |
CEP-NOVEL-2 (all species) |
|---|
| Seed |
ACACCCG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-2
Npo-Novel-2
Ovu-Novel-2
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ432306: 5515-5573 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAACGACAGCAAAUUCUAUGAUUGUUGCCGAACACCCGAGUGAGCGGCUGAGGAUUAAAAUACAUACCGAGCCCUUACGAGGGUGUUCGGCAACAGUUGACUAUCACAAGAUCUGUCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAACGACAGCAAAUUCUAU--| GA C GA AUUAAA
GAUUGUUGCCGAACACCC GUGAG GGCU GG \
UUGACAACGGCUUGUGGG CAUUC CCGA CC A
AGCUGUCUAGAACACUAUCAG^ AG - G- AUACAU
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACACCCGAGUGAGCGGCUGAGGA -24
Get sequence
|
|---|
| Star sequence |
Obi-Novel-2_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CGAGCCCUUACGAGGGUGUUCG -59
Get sequence
|
|---|
