| MirGeneDB ID | Obi-Novel-16-v2 |
|---|
| Family name |
COL-NOVEL-16 (all species) |
|---|
| Seed |
CCGAUUG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-16-v1
|
|---|
| Orthologues |
Esc-Novel-16
Ovu-Novel-16-v2
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ416971: 45159-45212 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAGAUGAACGCAUCUCACGGGUCAACACGUUCCGAUUGUUCUAAGUCCGGCUCUUAGUUAAAAGCCGGACUUGAAAAAUCGGAGUGUGUGAGCCGAUUCAGACACGAGACUAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAUGAACGCAUCUCA--| G A G U CUUA
CGG UCA CACGUUCCGAUU UUC AAGUCCGGCU G
GCC AGU GUGUGAGGCUAA AAG UUCAGGCCGA U
CAAUCAGAGCACAGACUUA^ G - A - AAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-16-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCCGAUUGUUCUAAGUCCGGCUC -23
Get sequence
|
|---|
| Star sequence |
Obi-Novel-16-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- GCCGGACUUGAAAAAUCGGAG -54
Get sequence
|
|---|
