| MirGeneDB ID | Obi-Novel-13 |
|---|
| Family name |
COL-NOVEL-13 (all species) |
|---|
| Seed |
UAGCUGU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-13
Ovu-Novel-13
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ422870: 205376-205431 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACAUAUAUGGAAAAUACGUGGGUGUGUCUGAUGGUGAUGAGGUCAGUUUGUCUUUCAUAAUGUGAUUAGCUGUCUCAUGAUCUUCAGGCAUACAUUUACAAUAAUCCAUCGAAGUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAUAUAUGGAAAAUACGUGG--| U G U U UUUCA
GUGUGUCUGA GGU AUGAGG CAGUU GUC \
CAUACGGACU CUA UACUCU GUCGA UAG U
UUGAAGCUACCUAAUAACAUUUA^ U G - U UGUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-13_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGGUGAUGAGGUCAGUUUGUC -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-13_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUAGCUGUCUCAUGAUCUUCA -56
Get sequence
|
|---|
