MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-12

Family name CEP-NOVEL-12 (all species)
Seed UUGGCAU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Novel-12  Npo-Novel-12  Ovu-Novel-12 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(PRJNA270931_OBI)
KQ416270: 137472-137529 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUUAUUGACAAACAGCUUGCGUGUAUGUUUGGCAUGGCAACCGCUUUGUGUAUAAGGCAUCACUAGUCGUUGACAUGCGCAAUACGUACGCGUAGACAUCGUACAGCCGAGCAAU
Get precursor sequence
Structure
        10         20        30          40        50        
GUGGUUAUUGACAAACAGC-            -   -|    G    C   UU  GUAUA 
                    UUGCGUGUAUGU UUG GCAUG CAAC GCU  GU     A
                    GAUGCGCAUGCA AAC CGUAC GUUG UGA  CA     G
UAACGAGCCGACAUGCUACA            U   G^    A    C   U-  CUACG 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Obi-Novel-12_5p

mirBase accessionNone
Sequence
0- UUUGGCAUGGCAACCGCUUUGU -22
Get sequence
Star sequence

Obi-Novel-12_3p*

mirBase accessionNone
Sequence
35- CUAGUCGUUGACAUGCGCAAUAC -58
Get sequence