MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-194-P1

Family name MIR-194 (all species)
Seed GUAACAG
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-194-1
Paralogues Oan-Mir-194-P2 
Orthologues Aca-Mir-194-P1  Ami-Mir-194-P1  Bta-Mir-194-P1  Cfa-Mir-194-P1  Cli-Mir-194-P1  Cmi-Mir-194-P1  Cpi-Mir-194-P1  Ebu-Mir-194-o1  Ete-Mir-194-P1  Gga-Mir-194-P1  Gja-Mir-194-P1  Hsa-Mir-194-P1  Lch-Mir-194-P1  Mml-Mir-194-P1  Mmu-Mir-194-P1  Mun-Mir-194-P1  Ocu-Mir-194-P1  Pbv-Mir-194-P1  Pma-Mir-194-o1  Rno-Mir-194-P1  Spt-Mir-194-P1  Sto-Mir-194-P1  Tgu-Mir-194-P1  Xla-Mir-194-P1a  Xla-Mir-194-P1b  Xtr-Mir-194-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041746.1: 8009904-8009959 [+]
Clustered miRNAs
(< 50kb from Mir-194-P1)
Mir-194-P1 NC_041746.1: 8009904-8009959 [+]
Mir-192-P1 NC_041746.1: 8010939-8010997 [+]
Precursor
(pre-Mir +30nt flank)
UAAUUUAACGAGACCAACAGUGUUAUCAUAUGUAACAGCAACUCCAUGUGGAUUAUGCUGAUUUCCAGUGGAGAGGCUGUUACUUUUGAUGGAAACUGGCAAACUACAGCUCCUCU
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Structure
        10         20         30        40        50        
UAAUUUAACGAGACCAA-    GU-|    UAU        AA      G    UUAUG 
                  CAGU   UAUCA   GUAACAGC  CUCCAU UGGA     \
                  GUCA   GUAGU   CAUUGUCG  GAGGUG ACCU     C
UCUCCUCGACAUCAAACG    AAG^    UUU        GA      -    UUAGU 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-194-P1_5p

mirBase accessionMIMAT0006999
Sequence
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Oan-Mir-194-P1_3p*

mirBase accessionNone
Sequence
34- CCAGUGGAGAGGCUGUUACUUU -56
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