MirGeneDB ID | Npo-Novel-6 |
---|---|
Family name | CEP-NOVEL-6 (all species) |
Seed | GAACCAU |
Species | Chambered Nautilus (Nautilus pompilius) |
MiRBase ID | |
Paralogues | |
Orthologues | Esc-Novel-6 Obi-Novel-6 Ovu-Novel-6 |
Node of Origin (locus) | Cephalopoda |
Node of Origin (family) | Cephalopoda |
Genome context (GCA_018389105_NPO) |
JACATO010000303.1: 1527089-1527147 [-] Ensembl |
Precursor (pre-Mir +30nt flank) | GGUGCCUUGAAGCUAUGUAUUGUCAUGUGGUGAACCAUGGUUAAUGAACAUUGUAUAUUAUAUGGCAAUGGUCUUGACCAUGUUUUACCAUAUGAAAUCCCAAGUGGUAUACAGGUCACGet precursor sequence |
Structure | 10 20 30 40 50 GGUGCCUUGAAGCUAUGUAUUG--| C U A UAUAU UCAUGUGGUGAA CAUGGUUAA GA CAUUG U AGUAUACCAUUU GUACCAGUU CU GUAAC A CACUGGACAUAUGGUGAACCCUAA^ U - G GGUAU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Npo-Novel-6_5p (predicted) |
mirBase accession | None |
Sequence |
0- UGAACCAUGGUUAAUGAACAUUG -23
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|
Star sequence | Npo-Novel-6_3p* (predicted) |
mirBase accession | None |
Sequence |
37- AUGGUCUUGACCAUGUUUUACC -59
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|