MirGeneDB 2.1

MirGeneDB ID

Npo-Novel-3

Family name CEP-NOVEL-3 (all species)
Seed UGUCGGC
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Esc-Novel-3-v1  Esc-Novel-3-v2  Esc-Novel-3-v3  Obi-Novel-3-v1  Obi-Novel-3-v2  Obi-Novel-3-v3  Ovu-Novel-3-v1  Ovu-Novel-3-v2  Ovu-Novel-3-v3 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_018389105_NPO)
JACATO010000115.1: 633204-633265 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCGUCAAGAACACCCGGGUAGUUCCAGCCAAACACCCCGCCGGCUGAAAAGGUCCUGGUUCUUACCUUGUCGGCUGACCGGUUGUUUGGUGGGUCCGCCUGUCAGUCUGCCUGCCAACAU
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Structure
        10           20        30        40         50        60
GGUCGUCAAGAACACCC---|   AGU    G       CC   C-       A    UCCUG 
                    GGGU   UCCA CCAAACA  CCG  CGGCUGA AAGG     G
                    UCCG   GGGU GGUUUGU  GGC  GUCGGCU UUCC     U
UACAACCGUCCGUCUGACUG^   CCU    -       U-   CA       G    AUUCU 
120       110       100         90         80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Npo-Novel-3_5p* (predicted)

mirBase accessionNone
Sequence
0- CAAACACCCCGCCGGCUGAAAAGG -24
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Mature sequence

Npo-Novel-3_3p (predicted)

mirBase accessionNone
Sequence
38- UUGUCGGCUGACCGGUUGUUUGGU -62
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