MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-28-P3

Family name MIR-28 (all species)
Seed AGGAGCU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-708
Paralogues Mmu-Mir-28-P1  Mmu-Mir-28-P2 
Orthologues Bta-Mir-28-P3  Cfa-Mir-28-P3  Cpo-Mir-28-P3  Dno-Mir-28-P3  Ete-Mir-28-P3  Hsa-Mir-28-P3  Mml-Mir-28-P3  Ocu-Mir-28-P3  Rno-Mir-28-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr7: 96249450-96249518 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGCUGUGUUUGAAAUGGGGACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAGAUGACUUGCACUUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGGCCUUACCCUAGUCAUCUCUCU
Get precursor sequence
Structure
        10         20         30        40        50        60    
ACAGCUGUGUUUGAAAU-   GA-|       A           A     C  GGGGUAGAUGAC 
                  GGG   CUGCCCUC AGGAGCUUACA UCUAG UG            \
                  UCC   GACGGGAG UCUUCGAGUGU AGAUC AC            U
UCUCUCUACUGAUCCCAU   GGG^       A           C     A  ACAAGUUCACGU 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-28-P3_5p

mirBase accessionMIMAT0004828
Sequence
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
Proposed targets microrna.org: MIMAT0004828
TargetScanVert: mmu-miR-708-5p
miRDB: MIMAT0004828
Star sequence

Mmu-Mir-28-P3_3p*

mirBase accessionMIMAT0003498
Sequence
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
Proposed targets microrna.org: MIMAT0003498
TargetScanVert: mmu-miR-708-3p
miRDB: MIMAT0003498