MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-194-P1

Family name MIR-194 (all species)
Seed GUAACAG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-194-1
Paralogues Mmu-Mir-194-P2 
Orthologues Aca-Mir-194-P1  Ami-Mir-194-P1  Bta-Mir-194-P1  Cfa-Mir-194-P1  Cli-Mir-194-P1  Cmi-Mir-194-P1  Cpi-Mir-194-P1  Ebu-Mir-194-o1  Ete-Mir-194-P1  Gga-Mir-194-P1  Gja-Mir-194-P1  Hsa-Mir-194-P1  Lch-Mir-194-P1  Mml-Mir-194-P1  Mun-Mir-194-P1  Oan-Mir-194-P1  Ocu-Mir-194-P1  Pbv-Mir-194-P1  Pma-Mir-194-o1  Rno-Mir-194-P1  Spt-Mir-194-P1  Sto-Mir-194-P1  Tgu-Mir-194-P1  Xla-Mir-194-P1a  Xla-Mir-194-P1b  Xtr-Mir-194-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr1: 185313325-185313381 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P1)		 Mir-194-P1 chr1: 185313325-185313381 [+] UCSC Ensembl
Mir-192-P1 chr1: 185313610-185313668 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAUCCGGCAAACUGAUGGAGUCAUCGGGUGUAACAGCAACUCCAUGUGGACUGUGCUCGGAUUCCAGUGGAGCUGCUGUUACUUCUGAUGGCCUCCAACCGGCUACAAACAUGGA
Get precursor sequence
Structure
        10         20         30        40        50        
CCCAUCCGGCAAACUGA-    -|        U         A      G    CUGUG 
                  UGGA GUCAUCGGG GUAACAGCA CUCCAU UGGA     C
                  ACCU CGGUAGUCU CAUUGUCGU GAGGUG ACCU     U
AGGUACAAACAUCGGCCA    C^        U         C      -    UAGGC 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-194-P1_5p
mirBase accessionMIMAT0000224
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Proposed targets microrna.org: MIMAT0000224
TargetScanVert: mmu-miR-194-5p
miRDB: MIMAT0000224
Star sequence

Mmu-Mir-194-P1_3p*
mirBase accessionMIMAT0016999
Sequence 
35- CCAGUGGAGCUGCUGUUACUUC -57
Get sequence
Proposed targets TargetScanVert: mmu-miR-194-1-3p
miRDB: MIMAT0016999