MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-362-P3

Family name MIR-362 (all species)
Seed AUCCUUU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-501
Paralogues Mml-Mir-362-P1  Mml-Mir-362-P2-v1  Mml-Mir-362-P2-v2  Mml-Mir-362-P4  Mml-Mir-362-P5 
Orthologues Cpo-Mir-362-P3  Hsa-Mir-362-P3  Mmu-Mir-362-P3  Ocu-Mir-362-P3  Rno-Mir-362-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 50018014-50018073 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P3)
Mir-188-P2 chrX: 50008239-50008297 [+] UCSC Ensembl
Mir-188-P1 chrX: 50008592-50008651 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P1 chrX: 50014029-50014087 [+] UCSC Ensembl
Mir-362-P5 chrX: 50017286-50017346 [+] UCSC Ensembl
Mir-362-P3 chrX: 50018014-50018073 [+] UCSC Ensembl
Mir-188-P3 chrX: 50020582-50020640 [+] UCSC Ensembl
Mir-362-P4 chrX: 50021934-50021993 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAGCCUUCUGCUCUGCUCUUCCUCUCUAAUCCUUUGUCCCUGGGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACA
Get precursor sequence
Structure
        10          20        30         40        50           
CCUGAGCCUUCUGCUCU--         CUCU-|      UGUC        AGA-  GCUUU 
                   GCUCUUCCU     AAUCCUU    CCUGGGUG    GU     \
                   UGAGGGGGA     UUAGGAA    GGACCCAC    CG     C
ACAGGAUACGCUUCUACAG         ACGUC^      C---        GUGA  UAAGU 
.       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-362-P3_5p

mirBase accessionMIMAT0006364
Sequence
0- AAUCCUUUGUCCCUGGGUGAGAGU -24
Get sequence
Proposed targets TargetScanVert: mml-miR-501-5p
Star sequence

Mml-Mir-362-P3_3p*

mirBase accessionMIMAT0026889
Sequence
37- AGUGCACCCAGGCAAGGAUUCUG -60
Get sequence
Proposed targets TargetScanVert: mml-miR-501-3p