| MirGeneDB ID | Mml-Mir-3200 |
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| Family name |
MIR-3200 (all species) |
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| Seed |
ACCUUGC |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-3200
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| Paralogues |
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| Orthologues |
Hsa-Mir-3200
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| Node of Origin (locus) |
Catarrhini
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| Node of Origin (family) |
Catarrhini
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Genome context
(rheMac8_trace) |
chr10: 72589416-72589479 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGAGAGACAAAGAAGGAGGUGGUCGAGGGAAUCUGAGAAGGCGCACAAGGUUUGUGUCCAAUACAGUCCACACCUUGCGCUACUCAGGUCUGCUCGUGCCCUCCCAUGAUAUCAGCUCUCCUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAGAGAGACAAAGAAGGA- U- - -| A AA CA UUGUGUCCA
GG GGU CGAG GGA UCUGAG GGCGCA AGGU A
CC CCG GCUC UCU GGACUC UCGCGU UCCA U
GUCCUCUCGACUAUAGUAC UC U G^ - A- -- CACCUGACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-3200_5p* |
| mirBase accession | MIMAT0027112 |
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| Sequence |
0- AAUCUGAGAAGGCGCACAAGGUU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-3200-5p
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| Mature sequence |
Mml-Mir-3200_3p |
| mirBase accession | MIMAT0024323 |
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| Sequence |
41- CACCUUGCGCUACUCAGGUCUGC -64
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-3200-3p
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