MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-190-P17

Family name MIR-190 (all species)
Seed GAUAUGU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-190-P14  Lpo-Mir-190-P15  Lpo-Mir-190-P16 
Orthologues Aae-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cgi-Mir-190  Cte-Mir-190  Dan-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Esc-Mir-190  Hme-Mir-190  Isc-Mir-190  Npo-Mir-190  Obi-Mir-190  Ovu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Sko-Mir-190  Tca-Mir-190  Xbo-Mir-190 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666961.1: 156503-156563 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAAGAAGAAAUUGGAAUCCUUUGCUGAAAGAUAUGUUUGAUAUUCUUGGUUGUUGCAUUUUUUUCAACCAGAAAUCAGACAUAUGCUUAUAGAGGAGGAGAGUAUCUUCUAACGAAGUC
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Structure
        10          20        30         40        50        60
UUCAAGAAGAAAUUGGAA--     UG   A   -|          A    U     UUGCA 
                    UCCUU  CUG AAG AUAUGUUUGAU UUCU GGUUG     U
                    AGGAG  GAU UUC UAUACAGACUA AAGA CCAAC     U
CUGAAGCAAUCUUCUAUGAG     GA   A   G^          -    -     UUUUU 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-190-P17_5p
mirBase accessionNone
Sequence 
0- AGAUAUGUUUGAUAUUCUUGGUUG -24
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Star sequence

Lpo-Mir-190-P17_3p*
mirBase accessionNone
Sequence 
38- ACCAGAAAUCAGACAUAUGCUUA -61
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