| MirGeneDB ID | Lch-Mir-192-P1 |
|---|---|
| Family name | MIR-192 (all species) |
| Seed | UGACCUA |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-192-P1 Ami-Mir-192-P1 Bta-Mir-192-P1 Cfa-Mir-192-P1 Cli-Mir-192-P1 Cmi-Mir-192-P1 Cpi-Mir-192-P1 Cpo-Mir-192-P1 Dno-Mir-192-P1 Ebu-Mir-192-o1 Ete-Mir-192-P1 Gga-Mir-192-P1 Gja-Mir-192-P1 Hsa-Mir-192-P1 Mdo-Mir-192-P1 Mml-Mir-192-P1 Mmu-Mir-192-P1 Mun-Mir-192-P1 Oan-Mir-192-P1 Oan-Mir-192-P1-as Ocu-Mir-192-P1 Pbv-Mir-192-P1 Pma-Mir-192-o1 Rno-Mir-192-P1 Spt-Mir-192-P1 Sto-Mir-192-P1 Tgu-Mir-192-P1 Xla-Mir-192-P1a Xla-Mir-192-P1b Xtr-Mir-192-P1 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH127009.1: 785039-785101 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGCCCCUAUAAGCAAUGGCUAACAGGACAAUGACCUAUGAAUUGACAGCCAGUGAAGUUGAUGAAUUUGUCUGUCAGUUCUAUAGGCCACUAUUCUGUAUCCAUCCUACCACCUCUAAGAUAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUGCCCCUAUAAGCAAU---| CUA CAA A - C GUGAAGU GG ACAGGA UG CCUAU GAAUUGACAG CA U CC UGUCUU AC GGAUA CUUGACUGUC GU G AUAGAAUCUCCACCAUCCUA^ UA- AUC C U U UUAAGUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Lch-Mir-192-P1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUGACCUAUGAAUUGACAGCCA -22
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|
| Star sequence | Lch-Mir-192-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- UCUGUCAGUUCUAUAGGCCACUA -63
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|
