MirGeneDB ID | Ete-Mir-95-P4 |
Family name |
MIR-95 (all species) |
Seed |
AAGUCUU |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-95-P4
Cfa-Mir-95-P4
Cpo-Mir-95-P4
Hsa-Mir-95-P4
Mml-Mir-95-P4
Mmu-Mir-95-P4
Ocu-Mir-95-P4
Rno-Mir-95-P4
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980336: 11901675-11901737 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CAUUGUUUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAGUCAGUGAACCAACAAGUCUUAUUUUAACACCUGUUAUGUGGAGGAUAAAGAACUACGGCUCAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUUGUUUUUCUUCAUG---| GG CCUC- U GAAAGAGU
CCU CAUAUAGCAGGU AAUAAG AUUUGUU \
GGA GUGUAUUGUCCA UUAUUC UGAACAA C
AGACUCGGCAUCAAGAAAUA^ G- CAAUU - CCAAGUGA
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Ete-Mir-95-P4_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
|
Mature sequence |
Ete-Mir-95-P4_3p (predicted) |
mirBase accession | None |
Sequence |
41- CAAGUCUUAUUUUAACACCUGU -63
Get sequence
|