MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-95-P4

Family name MIR-95 (all species)
Seed AAGUCUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-95-P4  Cfa-Mir-95-P4  Cpo-Mir-95-P4  Hsa-Mir-95-P4  Mml-Mir-95-P4  Mmu-Mir-95-P4  Ocu-Mir-95-P4  Rno-Mir-95-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980336: 11901675-11901737 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CAUUGUUUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAGUCAGUGAACCAACAAGUCUUAUUUUAACACCUGUUAUGUGGAGGAUAAAGAACUACGGCUCAGA
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Structure
        10           20        30         40        50        60 
CAUUGUUUUUCUUCAUG---|  GG            CCUC-      U       GAAAGAGU 
                    CCU  CAUAUAGCAGGU     AAUAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA     UUAUUC UGAACAA        C
AGACUCGGCAUCAAGAAAUA^  G-            CAAUU      -       CCAAGUGA 
 120       110       100         90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-95-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGUCCUCAAUAAGUAUUUGUU -22
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Mature sequence

Ete-Mir-95-P4_3p (predicted)

mirBase accessionNone
Sequence
41- CAAGUCUUAUUUUAACACCUGU -63
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