MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-376-P1

Family name MIR-376 (all species)
Seed UAGAUUC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-376-P3  Ete-Mir-376-P4 
Orthologues Bta-Mir-376-P1  Cfa-Mir-376-P1  Cpo-Mir-376-P1  Dno-Mir-376-P1  Hsa-Mir-376-P1  Mml-Mir-376-P1  Mmu-Mir-376-P1  Ocu-Mir-376-P1  Rno-Mir-376-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980297: 82299038-82299095 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AGGACGGAACCCUUCUUUGGUAUUUAAAAGGUAGAUUCUCCUUCUAUGAGUACAUUAUUUAUGAUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUUGGAGACCUU
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Structure
        10          20        30        40        50         
AGGACGGAACCCUUCUU--|      U    G  A    C    U      GUACAUUAU 
                   UGGUAUU AAAA GU GAUU UCCU CUAUGA         \
                   ACUAUGA UUUU CA CUAA AGGA GAUACU         U
UUCCAGAGGUUCGUCGUAA^      C    G  C    A    -      AAUUAGUAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-376-P1_5p

mirBase accessionNone
Sequence
0- GUAGAUUCUCCUUCUAUGAGUA -22
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Star sequence

Ete-Mir-376-P1_3p*

mirBase accessionNone
Sequence
37- AUCAUAGAGGAAAAUCCACGU -58
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