| MirGeneDB ID | Esc-Novel-59-v1 |
|---|
| Family name |
ESC-NOVEL-59 (all species) |
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| Seed |
UGGACAC |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
Esc-Novel-59-v2
|
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-59-v1_pre_SRIE01019374.1:6661976-6662238: 101-163 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGGCGAUAUGGCAUUGGUGAUGUACCCAACCGUUCAUAUCUGAGUCCAGUUGGAACACAGGUCUGAAGAACUGGACACACAAAUGAACGGUUGGGUGGAUAUAUCCAAAAUCCUGGCAGCCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAGGCGAUAUGGCAUUGGUG--| G AUC A GGAACACA
AU UACCCAACCGUUCAU UG GUCCAGUU \
UA GUGGGUUGGCAAGUA AC CAGGUCAA G
GCCGACGGUCCUAAAACCUAUA^ G AAC A GAAGUCUG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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|
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| Star sequence |
Esc-Novel-59-v1_5p* |
| mirBase accession | None |
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| Sequence |
0- CCGUUCAUAUCUGAGUCCAGUU -22
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-59-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- CUGGACACACAAAUGAACGGUU -63
Get sequence
|
|---|
