MirGeneDB 2.1

MirGeneDB ID

Esc-Novel-58

Family name ESC-NOVEL-58 (all species)
Seed AGUCUGC
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) E. scolopes
Node of Origin (family) E. scolopes
Genome context
(GCA_004765925.1_miRNA_LOCI)
Esc-Novel-58_pre_SRIE01026880.1:5349573-5349715: 43-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUCAUAGAUGCAAAAUCGUUCGGCAUUUAUAGUCUGCAAUCGACUUUAGGUAUUCUUUUACCGAAUCUGAAGACGGAAGCAGACUUAGAAUUCCGUAACUUUGACACAAACAAGCAAG
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Structure
        10         20         30        40        50         
CAUCAUAGAUGCAAAAUC-   -|  C    AU       AA   A        AUUCUU 
                   GUU CGG AUUU  AGUCUGC  UCG CUUUAGGU      \
                   CAA GCC UAAG  UCAGACG  GGC GAAGUCUA      U
GAACGAACAAACACAGUUU   U^  U    AU       AA   A        AGCCAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ce Li
Mature sequence

Esc-Novel-58_5p

mirBase accessionNone
Sequence
0- UAGUCUGCAAUCGACUUUAGGU -22
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Star sequence

Esc-Novel-58_3p*

mirBase accessionNone
Sequence
37- CUGAAGACGGAAGCAGACUUAG -59
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