MirGeneDB 2.1

MirGeneDB ID

Esc-Novel-22-v1

Family name COL-NOVEL-22 (all species)
Seed UUUCUGU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Novel-22-v2 
Orthologues Obi-Novel-22  Ovu-Novel-22 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_004765925.1_miRNA_LOCI)
Esc-Novel-22-v1_pre_SRIE01046427.1:101401-101659: 101-159 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAGGUAGAUACUUGGCGAUUGGGGUACGUUUUCUGUUGCGCCAAGGGCAUAUUCGUAUUCUCUAUGCUCUGUCGCACCAAGAAGACAUAUCUGUCGCCUCCGCUACAUCACUACCUC
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Structure
        10            20        30         40        50         
UGGAGGUAGAUACUUGG----|   UG     C       GU-    CCA        UUCGU 
                     CGAU  GGGUA GUUUUCU   UGCG   AGGGCAUA     \
                     GCUG  UCUAU CAGAAGA   ACGC   UCUCGUAU     A
CUCCAUCACUACAUCGCCUCC^   --     A       ACC    UG-        CUCUU 
       110       100          90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ce Li
Mature sequence

Esc-Novel-22-v1_5p

mirBase accessionNone
Sequence
0- UUUUCUGUUGCGCCAAGGGCAUA -23
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Star sequence

Esc-Novel-22-v1_3p*

mirBase accessionNone
Sequence
36- UGCUCUGUCGCACCAAGAAGACA -59
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