MirGeneDB 2.1
MirGeneDB ID

Esc-Mir-96-P1h

Family name MIR-96 (all species)
Seed AUUUGGC
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Ami-Mir-96-P1  Bfl-Mir-96-P1  Bla-Mir-96-P1  Bta-Mir-96-P1  Cfa-Mir-96-P1  Cgi-Mir-96-P1h  Cin-Mir-96-P1  Cli-Mir-96-P1  Cmi-Mir-96-P1  Cpi-Mir-96-P1  Cpo-Mir-96-P1  Cte-Mir-96-P1  Dno-Mir-96-P1  Efe-Mir-96-P1  Ete-Mir-96-P1  Gga-Mir-96-P1  Gja-Mir-96-P1  Hsa-Mir-96-P1  Isc-Mir-96-P1  Lan-Mir-96-P1  Lch-Mir-96-P1  Lgi-Mir-96-P1h  Loc-Mir-96-P1  Mdo-Mir-96-P1  Mml-Mir-96-P1  Mmu-Mir-96-P1  Mun-Mir-96-P1  Npo-Mir-96-P1h  Oan-Mir-96-P1  Ocu-Mir-96-P1  Ovu-Mir-96-P1h  Pbv-Mir-96-P1  Pfl-Mir-96-P1  Pmi-Mir-96-P1  Rno-Mir-96-P1  Sha-Mir-96-P1  Sko-Mir-96-P1  Spt-Mir-96-P1  Spu-Mir-96-P1  Sto-Mir-96-P1  Tgu-Mir-96-P1  Xbo-Mir-96-P1  Xtr-Mir-96-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Bilateria
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-96-P1h_pre_SRIE01034545.1:14764-15024: 101-161 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAAUUUUGAAGAAUUGAUGCUUGCUACUUAUUUGGCACUUGUGGAAUAAUCUUCACUUUCUUUUAGAUUAUACACCGGUGCCAAGUAAAAAGCGAGGCUCGAUAACGACACUUUGAUUA
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Structure
        10          20         30        40        50        60
AGGAAUUUUGAAGAAUU--| U    -   AC            U   GA      UUCACU 
                   GA GCUU GCU  UUAUUUGGCACU GUG  AUAAUC      U
                   CU CGGA CGA  AAUGAACCGUGG CAC  UAUUAG      U
AUUAGUUUCACAGCAAUAG^ -    G   AA            C   A-      AUUUUC 
 .       110        100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ce Li
Mature sequence

Esc-Mir-96-P1h_5p
mirBase accessionNone
Sequence 
0- UAUUUGGCACUUGUGGAAUAAUC -23
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Star sequence

Esc-Mir-96-P1h_3p* (predicted)
mirBase accessionNone
Sequence 
39- UUAUACACCGGUGCCAAGUAAA -61
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