MirGeneDB

MirGeneDB ID

Efe-Mir-210

Family name MIR-210 (all species)
Seed UGUGCGU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues
Orthologues Aae-Mir-210-v1  Aae-Mir-210-v2  Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bge-Mir-210-v1  Bge-Mir-210-v2  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Cte-Mir-210-P5  Cte-Mir-210-P6  Dan-Mir-210-v1  Dan-Mir-210-v2  Dme-Mir-210-v1  Dme-Mir-210-v2  Dmo-Mir-210-v1  Dmo-Mir-210-v2  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ete-Mir-210  Gga-Mir-210  Hme-Mir-210-P3  Hme-Mir-210-P4  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lgi-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pfl-Mir-210  Pmi-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spu-Mir-210-v1  Spu-Mir-210-v2  Sto-Mir-210-P1  Sto-Mir-210-P2  Tca-Mir-210-v1  Tca-Mir-210-v2  Tgu-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Efe_combined)
Efet.01.30643: 1269-1327 [-]
Precursor
(pre-Mir +30nt flank)
AGAUAUGUGAAGUUCUAUGGUGUUAACGUAGGUUACUGUUUUAUGUCACAUCAUUGUAAAGAUAAUGUUGUGCGUAAGACAGCAACUAACGUAACACACUUUUCACCAUACAACACAGC
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Structure
        10           20        30        40        50         
AGAUAUGUGAAGUUCUAUG---|     A   A    A          U    U  UUGUA 
                      GUGUUA CGU GGUU CUGUUUUAUG CACA CA     A
                      CACAAU GCA UCAA GACAGAAUGC GUGU GU     A
CGACACAACAUACCACUUUUCA^     -   A    C          -    U  AAUAG 
       110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Efe-Mir-210_5p*

MirBase accessionNone
Sequence
0- GGUUACUGUUUUAUGUCACAUCA -23
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Mature sequence

Efe-Mir-210_3p

MirBase accessionNone
Sequence
37- UUGUGCGUAAGACAGCAACUAA -59
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