MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-28-P1

Family name MIR-28 (all species)
Seed ACUAGAU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-28
Paralogues Dno-Mir-28-P2  Dno-Mir-28-P3 
Orthologues Bta-Mir-28-P1  Cfa-Mir-28-P1  Cpo-Mir-28-P1  Ete-Mir-28-P1  Hsa-Mir-28-P1  Mml-Mir-28-P1  Mmu-Mir-28-P1  Ocu-Mir-28-P1  Rno-Mir-28-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH569692: 396109-396170 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAGUGAAUAAAUAAUGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUUCCUUUUUGACUUUCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUUGUUCAACUGGAAAAGA
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Structure
        10          20        30        40        50        60
AAGAGUGAAUAAAUAAU--|  C         A                U  AGUUUCCUU 
                   GGU CUUGCCCUC AGGAGCUCACAGUCUA UG         U
                   UCA GGACGGGAG UCCUCGAGUGUUAGAU AC         U
AGAAAAGGUCAACUUGUUU^  C         G                C  CCUUUCAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-28-P1_5p*

mirBase accessionMIMAT0047547
Sequence
0- AAGGAGCUCACAGUCUAUUGAG -22
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Mature sequence

Dno-Mir-28-P1_3p

mirBase accessionMIMAT0047548
Sequence
40- CACUAGAUUGUGAGCUCCUGGA -62
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