Mir-67-as

MirGeneDB ID

Dme-Mir-67-as

Family name

MIR-67 (all species)

Seed

CACACCC

Species

Fruit fly (Drosophila melanogaster)

MiRBase ID

dme-mir-307b

Paralogues

Dme-Mir-67

Orthologues

Aae-Mir-67 Asu-Mir-67 Bge-Mir-67 Cbr-Mir-67 Cel-Mir-67 Cte-Mir-67 Dan-Mir-67 Dan-Mir-67-as Dmo-Mir-67 Dpu-Mir-67 Hme-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67

Node of Origin (locus)

Drosophila melanogaster group

Node of Origin (family)

Protostomia

Genome context
(dm6)

chr2R: 9621265-9621326 [+] UCSC Ensembl

Clustered MiRNAs
(< 10kb from Mir-67-as)

Mir-67 chr2R: 9621261-9621326 [-] UCSC Ensembl
Mir-67-as chr2R: 9621265-9621326 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AGUUUCGUGGAUACUCUGUCCUGCUAUCGCUCACUCAAGGAGGUUGUGAUGGAUACCAUAUCGAAAUAACAUCACACCCAGGUUGAGUGAGUCAAAGCAAGACAAAAUGCUGCUAACUUUGC

Get precursor sequence

Structure

        10          20        30        40        50        60
AGUUUCGUGGAUACUCU--|  C    AUC          GGA  U       GAUACCAU 
                   GUC UGCU   GCUCACUCAA   GG UGUGAUG        A
                   CAG ACGA   UGAGUGAGUU   CC ACACUAC        U
CGUUUCAAUCGUCGUAAAA^  A    AAC          GGA  C       AAUAAAGC 
120       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bo	He	L3	Fe	Fe	La	Wh

Star sequence

Dme-Mir-67-as_5p*

MirBase accession

MIMAT0012194

Sequence

0- UCACUCAAGGAGGUUGUGAUG -21

Get sequence

Validated targets

microrna.org: MIMAT0012194

Mature sequence

Dme-Mir-67-as_3p

MirBase accession

MIMAT0012195

Sequence

41- UCACACCCAGGUUGAGUGAGU -62

Get sequence

Validated targets

microrna.org: MIMAT0012195