MirGeneDB 2.1

MirGeneDB ID

Dma-Novel-6

Family name DMA-NOVEL-6 (all species)
Seed GGGGGAA
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) Daphnia
Node of Origin (family) Daphnia
Genome context
(DMA_ASM399081)
NC_046175.1: 6286446-6286507 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUUUCGUUUGUUCAAGACAGGCAUCAGGGGGGAACUUUACUCAGUUUGAUUCAUUUAAUUUGAAAGUCACUGGGUACGUUCGCCCUUGUUGAAUGAAUCUUAUAUUCCUUCAGUUCAU
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Structure
        10        20          30        40        50        60  
UUUUUUUUCGUUUGUUCAAGA--| GG  U      G    UU        UU    CAUUUA 
                       CA  CA CAGGGG GAAC  UACUCAGU  GAUU      \
                       GU  GU GUUCCC CUUG  AUGGGUCA  CUGA      A
UACUUGACUUCCUUAUAUUCUAA^ AA  U      G    C-        --    AAGUUU 
120       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Novel-6_5p

mirBase accessionNone
Sequence
0- GGGGGGAACUUUACUCAGUUUGAUU -25
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Co-mature sequence

Dma-Novel-6_3p

mirBase accessionNone
Sequence
40- UCACUGGGUACGUUCGCCCUUG -62
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