MirGeneDB ID | Dan-Mir-968 |
Family name |
MIR-968 (all species) |
Seed |
AAGUAGU |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dme-Mir-968
Dmo-Mir-968
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Dana_caf1) |
scaffold_12943: 1815568-1815630 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGGUUGAAUCCUAAAUUAUGGCAGUUUCCUUAAGUAGUAUCCAUUAAAGGGUCGUUAAUAUAUUCAAAGUGACCGUUUGAUGUACUACUUUAGGUAGCUCCAUUUAAAGUCGGCUAAAAUAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGGUUGAAUCCUAAAUU---| C U U UC G UUAAUAU
AUGG AGUU CCU AAGUAGUA CAUUAAA GGUCG \
UACC UCGA GGA UUCAUCAU GUAGUUU CCAGU A
GAAUAAAAUCGGCUGAAAUU^ - U U -- G GAAACUU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dan-Mir-968_5p |
MirBase accession | None |
Sequence |
0- UAAGUAGUAUCCAUUAAAGGGUCG -24
Get sequence
|
Star sequence |
Dan-Mir-968_3p* |
MirBase accession | None |
Sequence |
41- ACCGUUUGAUGUACUACUUUAG -63
Get sequence
|