| MirGeneDB ID | Dan-Mir-968 |
|---|
| Family name |
MIR-968 (all species) |
|---|
| Seed |
AAGUAGU |
|---|
| Species |
Fruit fly (Drosophila ananassae) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Dme-Mir-968
Dmo-Mir-968
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
|---|
Genome context
(Dana_caf1) |
scaffold_12943: 1815568-1815630 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGUUGAAUCCUAAAUUAUGGCAGUUUCCUUAAGUAGUAUCCAUUAAAGGGUCGUUAAUAUAUUCAAAGUGACCGUUUGAUGUACUACUUUAGGUAGCUCCAUUUAAAGUCGGCUAAAAUAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGUUGAAUCCUAAAUU---| C U U UC G UUAAUAU
AUGG AGUU CCU AAGUAGUA CAUUAAA GGUCG \
UACC UCGA GGA UUCAUCAU GUAGUUU CCAGU A
GAAUAAAAUCGGCUGAAAUU^ - U U -- G GAAACUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dan-Mir-968_5p |
| MirBase accession | None |
|---|
| Sequence |
0- UAAGUAGUAUCCAUUAAAGGGUCG -24
Get sequence
|
|---|
| Star sequence |
Dan-Mir-968_3p* |
| MirBase accession | None |
|---|
| Sequence |
41- ACCGUUUGAUGUACUACUUUAG -63
Get sequence
|
|---|
