MirGeneDB ID | Dan-Mir-1014 |
Family name |
MIR-1014 (all species) |
Seed |
UAUAAUG |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
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Paralogues |
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Orthologues |
Dme-Mir-1014
|
Node of Origin (locus) |
Drosophila melanogaster group
|
Node of Origin (family) |
Drosophila melanogaster group
|
Genome context (Dana_caf1) |
scaffold_12911: 3510633-3510700 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UGUUCGUCCCUGCACUGGCAUUCUCCCAAGGUAUAAUGAAAAUUGAUUUUAAUCACACGGAUCGGAGUGGCAAAAUUAAAAUUCAUUUUCAUUUGCAGUCACGGGAUACAAUGUUCACCUCAUCAAUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGUUCGUCCCUGCACUGGCAUUC AAG---| U U CACACGGAUC
UCCC GUA AAUGAAAAU GAUUUUAAU \
AGGG CGU UUACUUUUA UUAAAAUUA G
AUAACUACUCCACUUGUAACAU- CACUGA^ - C AAACGGUGAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Dicer site -1 relative to what is annotated here. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dan-Mir-1014_5p |
MirBase accession | None |
Sequence |
0- GUAUAAUGAAAAUUGAUUUUAAU -23
Get sequence
|
Co-mature sequence |
Dan-Mir-1014_3p |
MirBase accession | None |
Sequence |
46- UAAAAUUCAUUUUCAUUUGCAG -68
Get sequence
|