| MirGeneDB ID | Dan-Mir-1014 |
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| Family name |
MIR-1014 (all species) |
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| Seed |
UAUAAUG |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-1014
|
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| Node of Origin (locus) |
Drosophila melanogaster group
|
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| Node of Origin (family) |
Drosophila melanogaster group
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Genome context
(Dana_caf1) |
scaffold_12911: 3510633-3510700 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGUUCGUCCCUGCACUGGCAUUCUCCCAAGGUAUAAUGAAAAUUGAUUUUAAUCACACGGAUCGGAGUGGCAAAAUUAAAAUUCAUUUUCAUUUGCAGUCACGGGAUACAAUGUUCACCUCAUCAAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGUUCGUCCCUGCACUGGCAUUC AAG---| U U CACACGGAUC
UCCC GUA AAUGAAAAU GAUUUUAAU \
AGGG CGU UUACUUUUA UUAAAAUUA G
AUAACUACUCCACUUGUAACAU- CACUGA^ - C AAACGGUGAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer site -1 relative to what is annotated here. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Mir-1014_5p |
| MirBase accession | None |
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| Sequence |
0- GUAUAAUGAAAAUUGAUUUUAAU -23
Get sequence
|
|---|
| Co-mature sequence |
Dan-Mir-1014_3p |
| MirBase accession | None |
|---|
| Sequence |
46- UAAAAUUCAUUUUCAUUUGCAG -68
Get sequence
|
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