MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-210-P5

Family name MIR-210 (all species)
Seed UGUGCGU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-210b
Paralogues Cte-Mir-210-P6 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xtr-Mir-210 
Node of Origin (locus) C. teleta
Node of Origin (family) Bilateria
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_591: 25368-25430 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-210-P5)
Mir-210-P6 CAPTEscaffold_591: 19538-19606 [-] Ensembl
Mir-210-P5 CAPTEscaffold_591: 25368-25430 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCAUGAGAGUGUCCUCGGCUGUCACUGCAGUUGCUGCUUCAUGCACAAGCAUUAUGUAAUCAUAACCUGCUGUGCGUAAAACAGCGACCUUUGUGGGAGGUAGAAAUCAUAGUAGCUCUCA
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Structure
        10        20          30        40        50        60 
UGGCAUGAGAGUGUCCUCGG--| G    UGCA       C  C       A   UUAUGUA 
                      CU UCAC    GUUGCUG UU AUGCACA GCA       A
                      GA GGUG    CAGCGAC AA UGCGUGU CGU       U
ACUCUCGAUGAUACUAAAGAUG^ G    UUUC       A  A       -   CCAAUAC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Cte-Mir-210-P5_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUUGCUGCUUCAUGCACAAGCA -23
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Mature sequence

Cte-Mir-210-P5_3p

mirBase accessionMIMAT0013572
Sequence
41- CUGUGCGUAAAACAGCGACCUU -63
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