MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-1998

Family name MIR-1998 (all species)
Seed UUGAACG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-1998
Paralogues
Orthologues Efe-Mir-1998-P1  Efe-Mir-1998-P2 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_24: 172651-172724 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1998)		 Mir-2000 CAPTEscaffold_24: 172461-172517 [-] Ensembl
Mir-1998 CAPTEscaffold_24: 172651-172724 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUACCACGUACAUCUGCUGGGUCUGGUGGUGUAUAUUUCCGCGUCCAGACUCUUUGUGGUCCUGCAAUGGCAAAUUAUCGAGUUGAACGCAGAGAUGUACAUCACCAACCGCAGACCAAAUCAACACCCUAUC
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Structure
        10          20         30        40        50        60       
UGUACCACGUACAUCUG--   -|  C                C    CCA    CUUUGUGGUCCUGC 
                   CUG GGU UGGUGGUGUAUAUUUC GCGU   GACU              \
                   GAC CCA ACCACUACAUGUAGAG CGCA   UUGA              A
CUAUCCCACAACUAAACCA   G^  -                A    AG-    GCUAUUAAACGGUA 
  130       120       110        100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Cte-Mir-1998_5p*
mirBase accessionNone
Sequence 
0- UGUAUAUUUCCGCGUCCAGACU -22
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Mature sequence

Cte-Mir-1998_3p
mirBase accessionMIMAT0009709
Sequence 
52- GUUGAACGCAGAGAUGUACAUC -74
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