| MirGeneDB ID | Cgi-Mir-750 |
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| Family name |
MIR-750 (all species) |
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| Seed |
CAGAUCU |
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| Species |
Pacific oyster (Crassostrea gigas) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-750
Asu-Mir-750
Bge-Mir-750
Bpl-Mir-750
Csc-Mir-750-P8
Csc-Mir-750-P9
Cte-Mir-750
Dma-Mir-750
Dpu-Mir-750
Efe-Mir-750-P1
Efe-Mir-750-P2
Efe-Mir-750-P3
Esc-Mir-750
Hme-Mir-750
Isc-Mir-750
Lan-Mir-750
Lgi-Mir-750
Lpo-Mir-750-P5
Lpo-Mir-750-P6
Lpo-Mir-750-P7
Npo-Mir-750
Obi-Mir-750
Ovu-Mir-750
Sme-Mir-750
Tca-Mir-750
|
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| Node of Origin (locus) |
Protostomia
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| Node of Origin (family) |
Protostomia
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Genome context
(CGI_GCA_000297895.1) |
scaffold514: 103030-103087 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUCUGUUUCUGUUCAGAAGAUGCAUCAAUGAGUUGGAAGGUUUGGUCUCAGCAGUUCAGACCUUGCCAGAUCUAACUCUUCCAGCUCACUGCUGCAUUGUCAACUCUGCUUCCGCACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUCUGUUUCUGUUCAGAA-- U A -| U CA GUUC
GAUGCA CA UGAGUUGGAAG GUU GGUCU GCA A
UUACGU GU ACUCGACCUUC CAA CUAGA CGU G
GCACGCCUUCGUCUCAACUG C C U^ U C- UCCA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| A- |
D- |
D- |
Eg |
F- |
Gi |
He |
Ju |
L- |
Ma |
Ma |
Pe |
Re |
Sp |
Um |
Ea |
Fe |
Ha |
La |
Ma |
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| Star sequence |
Cgi-Mir-750_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUGGAAGGUUUGGUCUCAGCA -23
Get sequence
|
|---|
| Mature sequence |
Cgi-Mir-750_3p |
| mirBase accession | None |
|---|
| Sequence |
35- CCAGAUCUAACUCUUCCAGCUCA -58
Get sequence
|
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