| MirGeneDB ID | Cgi-Mir-2722 |
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| Family name |
MIR-2722 (all species) |
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| Seed |
AAGGUGU |
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| Species |
Pacific oyster (Crassostrea gigas) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-2722
Lgi-Mir-2722
Npo-Mir-2722
Obi-Mir-2722
Ovu-Mir-2722
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| Node of Origin (locus) |
Mollusca
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| Node of Origin (family) |
Mollusca
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Genome context
(CGI_GCA_000297895.1) |
scaffold1347: 252941-252998 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGAAAAUCCAGCUGAUUAGAAUUUGUUGGAAAGGUGUUUCACAGGCGCUACAUUGGAGAUGACGUGGCGCCGUGUAAACACCUACCCGACAGGUCAGCAAUGACGUCAUUACCUUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGAAAAUCCAGCUGAUUA---| A AA - A AUUGG
GA UUUGUUGG AGGUGUUU CAC GGCGCUAC A
CU GGACAGCC UCCACAAA GUG CCGCGGUG G
GUUUCCAUUACUGCAGUAACGA^ - CA U - CAGUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| A- |
D- |
D- |
Eg |
F- |
Gi |
He |
Ju |
L- |
Ma |
Ma |
Pe |
Re |
Sp |
Um |
Ea |
Fe |
Ha |
La |
Ma |
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| Mature sequence |
Cgi-Mir-2722_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAAGGUGUUUCACAGGCGCUAC -22
Get sequence
|
|---|
| Co-mature sequence |
Cgi-Mir-2722_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGGCGCCGUGUAAACACCUACCC -58
Get sequence
|
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