MirGeneDB 2.1
MirGeneDB ID

Cgi-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Pacific oyster (Crassostrea gigas)
MiRBase ID
Paralogues Cgi-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Asu-Mir-22-P2  Bge-Mir-22-P2  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Esc-Mir-22-P2  Hme-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lpo-Mir-22-P2a  Lpo-Mir-22-P2b  Lpo-Mir-22-P2c  Lpo-Mir-22-P2d  Npo-Mir-22-P2  Ovu-Mir-22-P2  Pfl-Mir-22-o2  Pmi-Mir-22-o2  Sko-Mir-22-o2  Spu-Mir-22-o2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CGI_GCA_000297895.1)		 scaffold726: 81942-82005 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUUUUCUCAAUGACAAGCUUGGAAUGGUAGUUUUUCCUUUGGCCAGCUAUCUCGUGCAAUUCUGAGCUGAGAGCUGCCAAAUGAAGGGCUGUUGUUUCUGCUCACCAAGCAAACUUCAUCAA
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Structure
        10           20        30        40        50        60   
GCUUUUUCUCAAUGACA---|  UU     GG         C      C   UA    GUGCAAU 
                    AGC  GGAAU  UAGUUUUUC UUUGGC AGC  UCUC       \
                    UCG  CUUUG  GUCGGGAAG AAACCG UCG  AGAG       U
AACUACUUCAAACGAACCAC^  U-     UU         U      -   --    UCGAGUC 
  120       110        100        90        80           70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
A- D- D- Eg F- Gi He Ju L- Ma Ma Pe Re Sp Um Ea Fe Ha La Ma
Star sequence

Cgi-Mir-22-P2_5p*
mirBase accessionNone
Sequence 
0- AGUUUUUCCUUUGGCCAGCUAUCUC -25
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Mature sequence

Cgi-Mir-22-P2_3p
mirBase accessionNone
Sequence 
42- GAGCUGCCAAAUGAAGGGCUGU -64
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