MirGeneDB 2.1

MirGeneDB ID

Cfa-Mir-95-P4

Family name MIR-95 (all species)
Seed AAGUCUU
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Mir-95-P1  Cfa-Mir-95-P2  Cfa-Mir-95-P3-v1  Cfa-Mir-95-P3-v2 
Orthologues Bta-Mir-95-P4  Cpo-Mir-95-P4  Ete-Mir-95-P4  Hsa-Mir-95-P4  Mml-Mir-95-P4  Mmu-Mir-95-P4  Ocu-Mir-95-P4  Rno-Mir-95-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chrX: 87401652-87401714 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAGAAUAAAUGAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAGAAAAAGCUACGACCCAGA
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Structure
        10           20        30        40         50        60 
GAAUGUGUUUCUUCAUG---|  GG            C     -    U       GAAAGAAU 
                    CCU  CAUAUAGCAGGU CUCAA UAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA GAGUU AUUC UGAACAA        A
AGACCCAGCAUCGAAAAAGA^  G-            C     U    -       CCAAGUAA 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-95-P4_5p*

mirBase accessionNone
Sequence
0- AGGUCCUCAAUAAGUAUUUGUU -22
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Mature sequence

Cfa-Mir-95-P4_3p

mirBase accessionNone
Sequence
41- CAAGUCUUAUUUGAGCACCUGU -63
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