MirGeneDB 2.1

MirGeneDB ID

Bpl-Novel-7-P1

Family name BPL-NOVEL-7 (all species)
Seed ACUAAAA
Species Rotifer (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Novel-7-P2 
Orthologues
Node of Origin (locus) B. plicatilis
Node of Origin (family) B. plicatilis
Genome context
(Bpl_ASM1027981)
QEOQ01000670.1: 1235666-1235724 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGGAUCAGUGAGUCAACUCGCUUCAGUGCACUAAAAUACGGUAUAGCGGGUAGGUAGUAACGACCGCUGUGCCCUAUUUUAGUACCACUGAACGGGUGCACAGAGCUACGCAAAUUU
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Structure
        10           20        30         40        50        
AGUGGAUCAGUGAGUCA---|    C       C-         C          GUAGGU 
                    ACUCG UUCAGUG  ACUAAAAUA GGUAUAGCGG      A
                    UGGGC AAGUCAC  UGAUUUUAU CCGUGUCGCC      G
UUUAAACGCAUCGAGACACG^    -       CA         C          AGCAAU 
       110       100         90        80        70        60
Deep sequencing
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CommentThe 3' end of the 5p arm may be monouridylated.
3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Bpl-Novel-7-P1_5p

mirBase accessionNone
Sequence
0- CACUAAAAUACGGUAUAGCGGG -22
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Star sequence

Bpl-Novel-7-P1_3p*

mirBase accessionNone
Sequence
36- CGCUGUGCCCUAUUUUAGUACCA -59
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