| MirGeneDB ID | Bge-Novel-25 |
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| Family name |
BGE-NOVEL-25 (all species) |
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| Seed |
AUCAGUC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ616038.1: 6151-6209 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAAACGUCCUGCUGAUGCUUCGGACUUCGACAGGAAAGUGGAGCCCGAUACAGAAUUGUAAUACUGUAUCAGUCUCACUUUCUUGUUGAAGUCCGAAAGCUGUUUUCAACAUUUAUAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGAAACGUCCUGCUGAU- -| GA CC GAAUU
GC UUCGGACUUCGACAGGAAAGUG GC GAUACA G
CG AAGCCUGAAGUUGUUCUUUCAC UG CUAUGU U
GAUAUUUACAACUUUUGU A^ UC A- CAUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Novel-25_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGGAAAGUGGAGCCCGAUACA -23
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-25_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UAUCAGUCUCACUUUCUUGUUG -59
Get sequence
|
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