MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-2-P3

Family name MIR-2 (all species)
Seed AGUCAAA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Bge-Mir-2-P2  Bge-Mir-2-P4c-v1  Bge-Mir-2-P4c-v2  Bge-Mir-2-P4d-v1  Bge-Mir-2-P4d-v2  Bge-Mir-2-P7 
Orthologues Aae-Mir-2-P3  Cbr-Mir-2-o3  Cel-Mir-2-o3  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Dan-Mir-2-P3a-v1  Dan-Mir-2-P3a-v2  Dan-Mir-2-P3b  Dma-Mir-2-P3  Dme-Mir-2-P3a  Dme-Mir-2-P3b  Dmo-Mir-2-P3b  Dpu-Mir-2-P3  Dsi-Mir-2-P3a  Dsi-Mir-2-P3b  Dya-Mir-2-P3a  Dya-Mir-2-P3b  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)
KZ615436.1: 353858-353916 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAGAAAUCAGCCUGUCCCUAUGUCCCAACAGUCAAAAUGACUGUGAUGUGUAGAUUUAAGUCAUAUCACAGCCAUUUUUGACGAGUUGGGCUGUAGGAUAUUACAUCAAUGAAACCA
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Structure
        10          20        30          40        50        
AGAAGAAAUCAGCCUGUC--      U      A-   -|     A          UAGAU 
                    CCUAUG CCCAAC  GUC AAAAUG CUGUGAUGUG     \
                    GGAUGU GGGUUG  CAG UUUUAC GACACUAUAC     U
ACCAAAGUAACUACAUUAUA      C      AG   U^     C          UGAAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-2-P3_5p

mirBase accessionNone
Sequence
0- CAGUCAAAAUGACUGUGAUGUG -22
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Co-mature sequence

Bge-Mir-2-P3_3p

mirBase accessionNone
Sequence
35- UAUCACAGCCAUUUUUGACGAGUU -59
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