MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-2-P2

Family name MIR-2 (all species)
Seed AUCACAG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Bge-Mir-2-P3  Bge-Mir-2-P4c-v1  Bge-Mir-2-P4c-v2  Bge-Mir-2-P4d-v1  Bge-Mir-2-P4d-v2  Bge-Mir-2-P7 
Orthologues Aae-Mir-2-P2  Csc-Mir-2-P2o  Dan-Mir-2-P2a  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2a  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2a  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Hme-Mir-2-P2c  Hme-Mir-2-P2d  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Tca-Mir-2-P2e  Tca-Mir-2-P2f 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)
KZ615136.1: 496274-496334 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUUUCCAAUAACAUUCCGUUGCACUGGUCGUCAAUUUGGUUGUGAAAUGUUGUAUUAAAAAUUCAUAUCACAGCCACUUUGAUGAGCUAGUUUUUCGGACCAUUCACCUGGAGAUCUG
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Structure
        10          20        30         40        50         
CUGCUUUCCAAUAACAU--    UUGC     -|      UU         A   UUGUAU 
                   UCCG    ACUGG UCGUCAA  UGGUUGUGA AUG      U
                   AGGC    UGAUC AGUAGUU  ACCGACACU UAC      A
GUCUAGAGGUCCACUUACC    UUUU     G^      UC         A   UUAAAA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-2-P2_5p*

mirBase accessionNone
Sequence
0- UCGUCAAUUUGGUUGUGAAAUG -22
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Mature sequence

Bge-Mir-2-P2_3p

mirBase accessionNone
Sequence
38- UAUCACAGCCACUUUGAUGAGCU -61
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