MirGeneDB

MirGeneDB ID

Aae-Mir-9-P10-v2

Family name MIR-9 (all species)
Seed UAAAGCU
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-79
Paralogues Aae-Mir-9-P7a  Aae-Mir-9-P7b  Aae-Mir-9-P8  Aae-Mir-9-P9  Aae-Mir-9-P10-v1 
Orthologues Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P10-v1  Dan-Mir-9-P10-v2  Dme-Mir-9-P10-v1  Dme-Mir-9-P10-v2  Dmo-Mir-9-P10-v1  Dmo-Mir-9-P10-v2  Hme-Mir-9-o10  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Pmi-Mir-9  Spu-Mir-9 
Node of Origin (locus) Diptera
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)
supercont1.785: 213278-213337 [+] Ensembl
Clustered MiRNAs
(< 10kb from Mir-9-P10-v2)
Mir-306 supercont1.785: 213078-213173 [+] Ensembl
Mir-9-P10-v1 supercont1.785: 213277-213338 [+] Ensembl
Mir-9-P10-v2 supercont1.785: 213278-213337 [+] Ensembl
Mir-9-P8 supercont1.785: 213584-213649 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAUGAGAAAACGGAACCCAUCGUCCAUGCUUUGGCGCUUUAGCUGUAUGAUAGAAUUUAAUAUUUCAUAAAGCUAGAUUACCAAAGCAUGGAAGGCUUGGGCGGUGUCGUCCCUCUAA
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Structure
        10        20          30        40        50         
AGAAUGAGAAAACGGAAC   UCG--|           CGC       G     UAGAAU 
                  CCA     UCCAUGCUUUGG   UUUAGCU UAUGA      U
                  GGU     AGGUACGAAACC   AGAUCGA AUACU      U
AAUCUCCCUGCUGUGGCG   UCGGA^           AUU       A     UUAUAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Aae-Mir-9-P10-v2_5p*

MirBase accessionMIMAT0014294
Sequence
0- CUUUGGCGCUUUAGCUGUAUGA -22
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Mature sequence

Aae-Mir-9-P10-v2_3p

MirBase accessionMIMAT0014295
Sequence
38- AUAAAGCUAGAUUACCAAAGCA -60
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