10          20        30        40        50         
GAGAAAACUGGGAUAUG--|      GC  C           A         UAGAUAGG 
                   CAGUGCA  CA CCAUAAAGUAG AAGCACUAC        A
                   GUCAUGU  GU GGUAUUUCAUC UUUGUGAUG        C
AAACUCCAGAGCAUCGCGG^      GA  A           C         UCGCAAGU 
.       110       100        90        80        70        60