10               20        30        40        50       
CGGCGUCUUCUCCGCGC-------|  GCAUGCA    AGG      G      C   GCCCU 
                        AGG       GGGA   GGGGGC GGGCCU GCG     G
                        UCC       CCCU   CCCCUG CUCGGA UGC     C
AGGGGGUCUAUUGGGGGAUAAAAC^  AAAUAG-    ---      A      C   UCCGU 
     110       100        90            80        70        60