10        20           30        40        50        60 
AGAGUCUCCAAAACCUACAA---|      AUCAA        CU           GUUAUGC 
                       AGUCACA     CAUUCAUU  GUCGGUGGGUU       U
                       UCGGUGU     GUAAGUGA  UAGUCACUCGA       G
AGACGACCGGGUCACAGAAAAGG^      CAAC-        C-           AGAGGAG 
 120       110       100        90          80        70