10            20        30        40        50        60
AAGUUACAGAACCUAGC----|     UA    C                   CA  GUUCGU 
                     GUGGCU  GGGG GGUUUGUACCGAUUCAGGG  AG      C
                     UACCGA  CUCC CUAAGCAUGGCUGAGUUUC  UC      G
GACAGAAAAGCUACUUUUUAG^     --    A                   A-  AAUGAA 
 .       110       100          90        80        70