10          20         30        40        50        60
NNNNNNNNNACCGACUGA--|   U   A-      C       C     GCC    UGAUC 
                    ACCG GUC  AGUCGG UUUCGCA UGAUU   CAGA     C
                    UGGC CGG  UCAGCC AAAGUGU ACUAG   GUCU     U
CAGCGACGACGCAGCGAGAC^   -   AG      A       C     A--    CCAGU 
.       110       100         90        80          70