##gff-version 3
# microRNAs:    MirGeneDB v2.0
# genome-build-id:  colLiv2
scaffold101	.	pre_miRNA	18430669	18430735	.	+	.	ID=Cli-Let-7-P1c_pre;Alias=MI0029887
scaffold101	.	miRNA	18430669	18430690	.	+	.	ID=Cli-Let-7-P1c_5p;Alias=MIMAT0038379
scaffold101	.	miRNA	18430714	18430735	.	+	.	ID=Cli-Let-7-P1c_3p*;Alias=MIMAT0038380
scaffold367	.	pre_miRNA	862707	862773	.	-	.	ID=Cli-Let-7-P1d_pre;Alias=MI0029883
scaffold367	.	miRNA	862752	862773	.	-	.	ID=Cli-Let-7-P1d_5p;Alias=MIMAT0038374
scaffold367	.	miRNA	862707	862728	.	-	.	ID=Cli-Let-7-P1d_3p*;Alias=MIMAT0038376
scaffold581	.	pre_miRNA	22176	22247	.	+	.	ID=Cli-Let-7-P2a1_pre;Alias=MI0029882
scaffold581	.	miRNA	22176	22197	.	+	.	ID=Cli-Let-7-P2a1_5p;Alias=MIMAT0038374
scaffold581	.	miRNA	22227	22247	.	+	.	ID=Cli-Let-7-P2a1_3p*;Alias=MIMAT0038375
scaffold383	.	pre_miRNA	360766	360836	.	-	.	ID=Cli-Let-7-P2a2_pre;Alias=MI0029884
scaffold383	.	miRNA	360815	360836	.	-	.	ID=Cli-Let-7-P2a2_5p;Alias=MIMAT0038374
scaffold383	.	miRNA	360766	360786	.	-	.	ID=Cli-Let-7-P2a2_3p*;Alias=MIMAT0038375
scaffold454	.	pre_miRNA	1198025	1198095	.	-	.	ID=Cli-Let-7-P2a4_pre;Alias=MI0029889
scaffold454	.	miRNA	1198074	1198095	.	-	.	ID=Cli-Let-7-P2a4_5p;Alias=MIMAT0038383
scaffold454	.	miRNA	1198025	1198045	.	-	.	ID=Cli-Let-7-P2a4_3p*;Alias=MIMAT0038384
scaffold581	.	pre_miRNA	22616	22692	.	+	.	ID=Cli-Let-7-P2b1_pre;Alias=MI0029890
scaffold581	.	miRNA	22616	22637	.	+	.	ID=Cli-Let-7-P2b1_5p;Alias=MIMAT0038385
scaffold581	.	miRNA	22672	22692	.	+	.	ID=Cli-Let-7-P2b1_3p*;Alias=MIMAT0038386
scaffold383	.	pre_miRNA	359902	359978	.	-	.	ID=Cli-Let-7-P2b2_pre;Alias=MI0029886
scaffold383	.	miRNA	359956	359978	.	-	.	ID=Cli-Let-7-P2b2_5p
scaffold383	.	miRNA	359902	359922	.	-	.	ID=Cli-Let-7-P2b2_3p*;Alias=MIMAT0038378
scaffold454	.	pre_miRNA	1197815	1197892	.	-	.	ID=Cli-Let-7-P2b4_pre;Alias=MI0029885
scaffold454	.	miRNA	1197871	1197892	.	-	.	ID=Cli-Let-7-P2b4_5p;Alias=MIMAT0038374
scaffold454	.	miRNA	1197815	1197835	.	-	.	ID=Cli-Let-7-P2b4_3p*;Alias=MIMAT0038377
scaffold581	.	pre_miRNA	23616	23690	.	+	.	ID=Cli-Let-7-P2c1_pre;Alias=MI0029888
scaffold581	.	miRNA	23616	23637	.	+	.	ID=Cli-Let-7-P2c1_5p;Alias=MIMAT0038381
scaffold581	.	miRNA	23670	23690	.	+	.	ID=Cli-Let-7-P2c1_3p*;Alias=MIMAT0038382
scaffold50	.	pre_miRNA	1403722	1403798	.	-	.	ID=Cli-Let-7-P2c2_pre;Alias=MI0029892
scaffold50	.	miRNA	1403776	1403798	.	-	.	ID=Cli-Let-7-P2c2_5p;Alias=MIMAT0038389
scaffold50	.	miRNA	1403722	1403742	.	-	.	ID=Cli-Let-7-P2c2_3p*;Alias=MIMAT0038390
scaffold335	.	pre_miRNA	757947	758024	.	-	.	ID=Cli-Let-7-P2c3_pre;Alias=MI0029891
scaffold335	.	miRNA	758003	758024	.	-	.	ID=Cli-Let-7-P2c3_5p;Alias=MIMAT0038387
scaffold335	.	miRNA	757947	757967	.	-	.	ID=Cli-Let-7-P2c3_3p*;Alias=MIMAT0038388
scaffold23	.	pre_miRNA	298717	298777	.	-	.	ID=Cli-Mir-1-P1_pre;Alias=MI0029894
scaffold23	.	miRNA	298755	298777	.	-	.	ID=Cli-Mir-1-P1_5p*;Alias=MIMAT0038393
scaffold23	.	miRNA	298717	298738	.	-	.	ID=Cli-Mir-1-P1_3p;Alias=MIMAT0038392
C16600502	.	pre_miRNA	233	292	.	+	.	ID=Cli-Mir-1-P2_pre;Alias=MI0030013
C16600502	.	miRNA	233	255	.	+	.	ID=Cli-Mir-1-P2_5p*;Alias=MIMAT0038588
C16600502	.	miRNA	271	292	.	+	.	ID=Cli-Mir-1-P2_3p;Alias=MIMAT0038589
scaffold36	.	pre_miRNA	3131822	3131882	.	-	.	ID=Cli-Mir-1-P3_pre;Alias=MI0029893
scaffold36	.	miRNA	3131860	3131882	.	-	.	ID=Cli-Mir-1-P3_5p*;Alias=MIMAT0038391
scaffold36	.	miRNA	3131822	3131843	.	-	.	ID=Cli-Mir-1-P3_3p;Alias=MIMAT0038392
scaffold391	.	pre_miRNA	951021	951083	.	-	.	ID=Cli-Mir-1-P4_pre;Alias=MI0029895
scaffold391	.	miRNA	951061	951083	.	-	.	ID=Cli-Mir-1-P4_5p*;Alias=MIMAT0038394
scaffold391	.	miRNA	951021	951042	.	-	.	ID=Cli-Mir-1-P4_3p;Alias=MIMAT0038395
scaffold150	.	pre_miRNA	999185	999248	.	-	.	ID=Cli-Mir-7-P1_pre;Alias=MI0029897
scaffold150	.	miRNA	999225	999248	.	-	.	ID=Cli-Mir-7-P1_5p;Alias=MIMAT0038396
scaffold150	.	miRNA	999185	999206	.	-	.	ID=Cli-Mir-7-P1_3p*;Alias=MIMAT0038398
scaffold432	.	pre_miRNA	147017	147080	.	+	.	ID=Cli-Mir-7-P2_pre;Alias=MI0029896
scaffold432	.	miRNA	147017	147040	.	+	.	ID=Cli-Mir-7-P2_5p;Alias=MIMAT0038396
scaffold432	.	miRNA	147059	147080	.	+	.	ID=Cli-Mir-7-P2_3p*;Alias=MIMAT0038397
scaffold1374	.	pre_miRNA	107550	107615	.	-	.	ID=Cli-Mir-7-P3_pre;Alias=MI0029899
scaffold1374	.	miRNA	107592	107615	.	-	.	ID=Cli-Mir-7-P3_5p;Alias=MIMAT0038400
scaffold1374	.	miRNA	107550	107571	.	-	.	ID=Cli-Mir-7-P3_3p*
scaffold133	.	pre_miRNA	436075	436137	.	+	.	ID=Cli-Mir-7-P4_pre;Alias=MI0029898
scaffold133	.	miRNA	436075	436098	.	+	.	ID=Cli-Mir-7-P4_5p;Alias=MIMAT0038396
scaffold133	.	miRNA	436116	436137	.	+	.	ID=Cli-Mir-7-P4_3p*;Alias=MIMAT0038399
scaffold693	.	pre_miRNA	2377086	2377145	.	+	.	ID=Cli-Mir-8-P1a_pre;Alias=MI0030006
scaffold693	.	miRNA	2377086	2377107	.	+	.	ID=Cli-Mir-8-P1a_5p*;Alias=MIMAT0038577
scaffold693	.	miRNA	2377123	2377145	.	+	.	ID=Cli-Mir-8-P1a_3p;Alias=MIMAT0038578
scaffold693	.	pre_miRNA	2379416	2379476	.	+	.	ID=Cli-Mir-8-P2a_pre;Alias=MI0030005
scaffold693	.	miRNA	2379416	2379437	.	+	.	ID=Cli-Mir-8-P2a_5p*;Alias=MIMAT0038575
scaffold693	.	miRNA	2379454	2379476	.	+	.	ID=Cli-Mir-8-P2a_3p;Alias=MIMAT0038576
scaffold693	.	pre_miRNA	2382092	2382150	.	+	.	ID=Cli-Mir-8-P3a_pre;Alias=MI0030041
scaffold693	.	miRNA	2382092	2382112	.	+	.	ID=Cli-Mir-8-P3a_5p*;Alias=MIMAT0038634
scaffold693	.	miRNA	2382129	2382150	.	+	.	ID=Cli-Mir-8-P3a_3p;Alias=MIMAT0038635
scaffold114	.	pre_miRNA	234187	234246	.	-	.	ID=Cli-Mir-9-P2_pre;Alias=MI0029901
scaffold114	.	miRNA	234224	234246	.	-	.	ID=Cli-Mir-9-P2_5p;Alias=MIMAT0038401
scaffold114	.	miRNA	234187	234209	.	-	.	ID=Cli-Mir-9-P2_3p*;Alias=MIMAT0038402
scaffold404	.	pre_miRNA	120599	120660	.	-	.	ID=Cli-Mir-9-P3_pre;Alias=MI0029900
scaffold404	.	miRNA	120638	120660	.	-	.	ID=Cli-Mir-9-P3_5p;Alias=MIMAT0038401
scaffold404	.	miRNA	120599	120621	.	-	.	ID=Cli-Mir-9-P3_3p*;Alias=MIMAT0038402
scaffold194	.	pre_miRNA	244986	245045	.	+	.	ID=Cli-Mir-9-P4_pre;Alias=MI0029902
scaffold194	.	miRNA	244986	245008	.	+	.	ID=Cli-Mir-9-P4_5p;Alias=MIMAT0038401
scaffold194	.	miRNA	245023	245045	.	+	.	ID=Cli-Mir-9-P4_3p*;Alias=MIMAT0038403
scaffold893	.	pre_miRNA	612555	612616	.	-	.	ID=Cli-Mir-10-P1b-v1_pre;Alias=MI0029904
scaffold893	.	miRNA	612595	612616	.	-	.	ID=Cli-Mir-10-P1b-v1_5p;Alias=MIMAT0038406
scaffold893	.	miRNA	612555	612575	.	-	.	ID=Cli-Mir-10-P1b-v1_3p*;Alias=MIMAT0038407
scaffold265	.	pre_miRNA	1564493	1564554	.	+	.	ID=Cli-Mir-10-P1c-v1_pre;Alias=MI0029903
scaffold265	.	miRNA	1564493	1564514	.	+	.	ID=Cli-Mir-10-P1c-v1_5p;Alias=MIMAT0038404
scaffold265	.	miRNA	1564534	1564554	.	+	.	ID=Cli-Mir-10-P1c-v1_3p*;Alias=MIMAT0038405
scaffold922	.	pre_miRNA	255116	255177	.	+	.	ID=Cli-Mir-10-P1d-v1_pre;Alias=MI0029905
scaffold922	.	miRNA	255116	255138	.	+	.	ID=Cli-Mir-10-P1d-v1_5p;Alias=MIMAT0038408
scaffold922	.	miRNA	255156	255177	.	+	.	ID=Cli-Mir-10-P1d-v1_3p*;Alias=MIMAT0038409
scaffold101	.	pre_miRNA	18429914	18429972	.	+	.	ID=Cli-Mir-10-P2c_pre;Alias=MI0029945
scaffold101	.	miRNA	18429914	18429935	.	+	.	ID=Cli-Mir-10-P2c_5p;Alias=MIMAT0038478
scaffold101	.	miRNA	18429951	18429972	.	+	.	ID=Cli-Mir-10-P2c_3p*;Alias=MIMAT0038479
scaffold367	.	pre_miRNA	869683	869739	.	-	.	ID=Cli-Mir-10-P2d_pre;Alias=MI0029946
scaffold367	.	miRNA	869718	869739	.	-	.	ID=Cli-Mir-10-P2d_5p;Alias=MIMAT0038480
scaffold367	.	miRNA	869683	869704	.	-	.	ID=Cli-Mir-10-P2d_3p*;Alias=MIMAT0038481
scaffold101	.	pre_miRNA	18463427	18463488	.	+	.	ID=Cli-Mir-10-P3c_pre;Alias=MI0029957
scaffold101	.	miRNA	18463427	18463448	.	+	.	ID=Cli-Mir-10-P3c_5p;Alias=MIMAT0038496
scaffold101	.	miRNA	18463467	18463488	.	+	.	ID=Cli-Mir-10-P3c_3p*;Alias=MIMAT0038498
scaffold367	.	pre_miRNA	846267	846328	.	-	.	ID=Cli-Mir-10-P3d_pre;Alias=MI0029956
scaffold367	.	miRNA	846307	846328	.	-	.	ID=Cli-Mir-10-P3d_5p;Alias=MIMAT0038496
scaffold367	.	miRNA	846267	846288	.	-	.	ID=Cli-Mir-10-P3d_3p*;Alias=MIMAT0038497
scaffold17	.	pre_miRNA	15185606	15185664	.	-	.	ID=Cli-Mir-15-P1a_pre;Alias=MI0029906
scaffold17	.	miRNA	15185643	15185664	.	-	.	ID=Cli-Mir-15-P1a_5p;Alias=MIMAT0038410
scaffold17	.	miRNA	15185606	15185627	.	-	.	ID=Cli-Mir-15-P1a_3p*;Alias=MIMAT0038411
scaffold258	.	pre_miRNA	1615632	1615691	.	+	.	ID=Cli-Mir-15-P1b_pre;Alias=MI0029907
scaffold258	.	miRNA	1615632	1615653	.	+	.	ID=Cli-Mir-15-P1b_5p;Alias=MIMAT0038412
scaffold258	.	miRNA	1615670	1615691	.	+	.	ID=Cli-Mir-15-P1b_3p*;Alias=MIMAT0038413
scaffold72	.	pre_miRNA	3554771	3554828	.	-	.	ID=Cli-Mir-15-P1c_pre;Alias=MI0029908
scaffold72	.	miRNA	3554807	3554828	.	-	.	ID=Cli-Mir-15-P1c_5p;Alias=MIMAT0038414
scaffold72	.	miRNA	3554771	3554792	.	-	.	ID=Cli-Mir-15-P1c_3p*;Alias=MIMAT0038415
scaffold17	.	pre_miRNA	15185461	15185523	.	-	.	ID=Cli-Mir-15-P2a_pre;Alias=MI0029909
scaffold17	.	miRNA	15185502	15185523	.	-	.	ID=Cli-Mir-15-P2a_5p;Alias=MIMAT0038416
scaffold17	.	miRNA	15185461	15185483	.	-	.	ID=Cli-Mir-15-P2a_3p*;Alias=MIMAT0038417
scaffold258	.	pre_miRNA	1615804	1615868	.	+	.	ID=Cli-Mir-15-P2b_pre;Alias=MI0029910
scaffold258	.	miRNA	1615804	1615826	.	+	.	ID=Cli-Mir-15-P2b_5p;Alias=MIMAT0038416
scaffold258	.	miRNA	1615846	1615868	.	+	.	ID=Cli-Mir-15-P2b_3p*;Alias=MIMAT0038418
scaffold72	.	pre_miRNA	3554294	3554358	.	-	.	ID=Cli-Mir-15-P2c_pre;Alias=MI0029911
scaffold72	.	miRNA	3554337	3554358	.	-	.	ID=Cli-Mir-15-P2c_5p;Alias=MIMAT0038419
scaffold72	.	miRNA	3554294	3554315	.	-	.	ID=Cli-Mir-15-P2c_3p*;Alias=MIMAT0038420
scaffold183	.	pre_miRNA	2837971	2838031	.	-	.	ID=Cli-Mir-17-P1a_pre;Alias=MI0029912
scaffold183	.	miRNA	2838009	2838031	.	-	.	ID=Cli-Mir-17-P1a_5p;Alias=MIMAT0038421
scaffold183	.	miRNA	2837971	2837993	.	-	.	ID=Cli-Mir-17-P1a_3p*;Alias=MIMAT0038422
scaffold72	.	pre_miRNA	3452469	3452526	.	-	.	ID=Cli-Mir-17-P1c_pre;Alias=MI0029951
scaffold72	.	miRNA	3452504	3452526	.	-	.	ID=Cli-Mir-17-P1c_5p;Alias=MIMAT0038487
scaffold72	.	miRNA	3452469	3452491	.	-	.	ID=Cli-Mir-17-P1c_3p*;Alias=MIMAT0038488
scaffold183	.	pre_miRNA	2837820	2837884	.	-	.	ID=Cli-Mir-17-P2a_pre;Alias=MI0029913
scaffold183	.	miRNA	2837862	2837884	.	-	.	ID=Cli-Mir-17-P2a_5p;Alias=MIMAT0038423
scaffold183	.	miRNA	2837820	2837843	.	-	.	ID=Cli-Mir-17-P2a_3p*;Alias=MIMAT0038424
scaffold72	.	pre_miRNA	3452309	3452373	.	-	.	ID=Cli-Mir-17-P2c_pre;Alias=MI0029914
scaffold72	.	miRNA	3452354	3452373	.	-	.	ID=Cli-Mir-17-P2c_5p;Alias=MIMAT0038425
scaffold72	.	miRNA	3452309	3452330	.	-	.	ID=Cli-Mir-17-P2c_3p*;Alias=MIMAT0038426
scaffold183	.	pre_miRNA	2837507	2837565	.	-	.	ID=Cli-Mir-17-P4a_pre;Alias=MI0029918
scaffold183	.	miRNA	2837543	2837565	.	-	.	ID=Cli-Mir-17-P4a_5p;Alias=MIMAT0038432
scaffold183	.	miRNA	2837507	2837529	.	-	.	ID=Cli-Mir-17-P4a_3p*;Alias=MIMAT0038433
scaffold72	.	pre_miRNA	3452115	3452175	.	-	.	ID=Cli-Mir-17-P4c_pre;Alias=MI0029919
scaffold72	.	miRNA	3452153	3452175	.	-	.	ID=Cli-Mir-17-P4c_5p;Alias=MIMAT0038434
scaffold72	.	miRNA	3452115	3452137	.	-	.	ID=Cli-Mir-17-P4c_3p*;Alias=MIMAT0038435
scaffold183	.	pre_miRNA	2837681	2837738	.	-	.	ID=Cli-Mir-19-P1a_pre;Alias=MI0029915
scaffold183	.	miRNA	2837718	2837738	.	-	.	ID=Cli-Mir-19-P1a_5p*;Alias=MIMAT0038427
scaffold183	.	miRNA	2837681	2837703	.	-	.	ID=Cli-Mir-19-P1a_3p;Alias=MIMAT0038428
scaffold183	.	pre_miRNA	2837370	2837430	.	-	.	ID=Cli-Mir-19-P2a_pre;Alias=MI0029916
scaffold183	.	miRNA	2837408	2837430	.	-	.	ID=Cli-Mir-19-P2a_5p*;Alias=MIMAT0038429
scaffold183	.	miRNA	2837370	2837392	.	-	.	ID=Cli-Mir-19-P2a_3p;Alias=MIMAT0038430
scaffold72	.	pre_miRNA	3451991	3452050	.	-	.	ID=Cli-Mir-19-P2c_pre;Alias=MI0029917
scaffold72	.	miRNA	3452027	3452050	.	-	.	ID=Cli-Mir-19-P2c_5p*;Alias=MIMAT0038431
scaffold72	.	miRNA	3451991	3452013	.	-	.	ID=Cli-Mir-19-P2c_3p;Alias=MIMAT0038430
scaffold580	.	pre_miRNA	435005	435064	.	-	.	ID=Cli-Mir-21_pre;Alias=MI0029920
scaffold580	.	miRNA	435041	435064	.	-	.	ID=Cli-Mir-21_5p;Alias=MIMAT0038436
scaffold580	.	miRNA	435005	435026	.	-	.	ID=Cli-Mir-21_3p*;Alias=MIMAT0038437
scaffold94	.	pre_miRNA	2621552	2621614	.	-	.	ID=Cli-Mir-22-P1b_pre;Alias=MI0029921
scaffold94	.	miRNA	2621593	2621614	.	-	.	ID=Cli-Mir-22-P1b_5p*;Alias=MIMAT0038438
scaffold94	.	miRNA	2621552	2621573	.	-	.	ID=Cli-Mir-22-P1b_3p;Alias=MIMAT0038439
scaffold226	.	pre_miRNA	156772	156831	.	+	.	ID=Cli-Mir-23-P2_pre;Alias=MI0029922
scaffold226	.	miRNA	156772	156792	.	+	.	ID=Cli-Mir-23-P2_5p*;Alias=MIMAT0038440
scaffold226	.	miRNA	156809	156831	.	+	.	ID=Cli-Mir-23-P2_3p;Alias=MIMAT0038441
scaffold370	.	pre_miRNA	399891	399951	.	-	.	ID=Cli-Mir-26-P1_pre;Alias=MI0029923
scaffold370	.	miRNA	399930	399951	.	-	.	ID=Cli-Mir-26-P1_5p;Alias=MIMAT0038442
scaffold370	.	miRNA	399891	399912	.	-	.	ID=Cli-Mir-26-P1_3p*;Alias=MIMAT0038443
scaffold32	.	pre_miRNA	1151298	1151358	.	+	.	ID=Cli-Mir-26-P2_pre;Alias=MI0029924
scaffold32	.	miRNA	1151298	1151319	.	+	.	ID=Cli-Mir-26-P2_5p;Alias=MIMAT0038442
scaffold32	.	miRNA	1151337	1151358	.	+	.	ID=Cli-Mir-26-P2_3p*;Alias=MIMAT0038444
scaffold226	.	pre_miRNA	157004	157066	.	+	.	ID=Cli-Mir-27-P2_pre;Alias=MI0029925
scaffold226	.	miRNA	157004	157026	.	+	.	ID=Cli-Mir-27-P2_5p*;Alias=MIMAT0038445
scaffold226	.	miRNA	157046	157066	.	+	.	ID=Cli-Mir-27-P2_3p;Alias=MIMAT0038446
scaffold137	.	pre_miRNA	49405	49468	.	-	.	ID=Cli-Mir-29-P1b-v1_pre;Alias=MI0029928
scaffold137	.	miRNA	49445	49468	.	-	.	ID=Cli-Mir-29-P1b-v1_5p*;Alias=MIMAT0038449
scaffold137	.	miRNA	49405	49427	.	-	.	ID=Cli-Mir-29-P1b-v1_3p;Alias=MIMAT0038450
scaffold454	.	pre_miRNA	2208566	2208629	.	-	.	ID=Cli-Mir-29-P1d-v1_pre;Alias=MI0029929
scaffold454	.	miRNA	2208606	2208629	.	-	.	ID=Cli-Mir-29-P1d-v1_5p*
scaffold454	.	miRNA	2208566	2208588	.	-	.	ID=Cli-Mir-29-P1d-v1_3p;Alias=MIMAT0038450
scaffold137	.	pre_miRNA	48230	48289	.	-	.	ID=Cli-Mir-29-P2b_pre;Alias=MI0029926
scaffold137	.	miRNA	48267	48289	.	-	.	ID=Cli-Mir-29-P2b_5p*;Alias=MIMAT0038447
scaffold137	.	miRNA	48230	48251	.	-	.	ID=Cli-Mir-29-P2b_3p;Alias=MIMAT0038448
scaffold454	.	pre_miRNA	2207703	2207762	.	-	.	ID=Cli-Mir-29-P2d_pre;Alias=MI0029927
scaffold454	.	miRNA	2207740	2207762	.	-	.	ID=Cli-Mir-29-P2d_5p*
scaffold454	.	miRNA	2207703	2207724	.	-	.	ID=Cli-Mir-29-P2d_3p;Alias=MIMAT0038448
scaffold419	.	pre_miRNA	3168635	3168692	.	-	.	ID=Cli-Mir-30-P1a_pre;Alias=MI0029933
scaffold419	.	miRNA	3168669	3168692	.	-	.	ID=Cli-Mir-30-P1a_5p;Alias=MIMAT0038456
scaffold419	.	miRNA	3168635	3168656	.	-	.	ID=Cli-Mir-30-P1a_3p*;Alias=MIMAT0038457
scaffold102	.	pre_miRNA	5103433	5103496	.	+	.	ID=Cli-Mir-30-P1b_pre;Alias=MI0029930
scaffold102	.	miRNA	5103433	5103456	.	+	.	ID=Cli-Mir-30-P1b_5p;Alias=MIMAT0038451
scaffold102	.	miRNA	5103475	5103496	.	+	.	ID=Cli-Mir-30-P1b_3p*;Alias=MIMAT0038452
scaffold391	.	pre_miRNA	336860	336923	.	-	.	ID=Cli-Mir-30-P1d_pre;Alias=MI0029934
scaffold391	.	miRNA	336900	336923	.	-	.	ID=Cli-Mir-30-P1d_5p;Alias=MIMAT0038458
scaffold391	.	miRNA	336860	336881	.	-	.	ID=Cli-Mir-30-P1d_3p*;Alias=MIMAT0038459
scaffold102	.	pre_miRNA	5128901	5128962	.	+	.	ID=Cli-Mir-30-P2b_pre;Alias=MI0029932
scaffold102	.	miRNA	5128901	5128924	.	+	.	ID=Cli-Mir-30-P2b_5p;Alias=MIMAT0038453
scaffold102	.	miRNA	5128941	5128962	.	+	.	ID=Cli-Mir-30-P2b_3p*;Alias=MIMAT0038455
scaffold391	.	pre_miRNA	335122	335181	.	-	.	ID=Cli-Mir-30-P2d_pre;Alias=MI0029931
scaffold391	.	miRNA	335158	335181	.	-	.	ID=Cli-Mir-30-P2d_5p;Alias=MIMAT0038453
scaffold391	.	miRNA	335122	335143	.	-	.	ID=Cli-Mir-30-P2d_3p*;Alias=MIMAT0038454
scaffold476	.	pre_miRNA	622320	622378	.	+	.	ID=Cli-Mir-31_pre;Alias=MI0029935
scaffold476	.	miRNA	622320	622342	.	+	.	ID=Cli-Mir-31_5p;Alias=MIMAT0038460
scaffold476	.	miRNA	622356	622378	.	+	.	ID=Cli-Mir-31_3p*;Alias=MIMAT0038461
scaffold231	.	pre_miRNA	729048	729109	.	-	.	ID=Cli-Mir-32_pre;Alias=MI0029936
scaffold231	.	miRNA	729088	729109	.	-	.	ID=Cli-Mir-32_5p;Alias=MIMAT0038462
scaffold231	.	miRNA	729048	729068	.	-	.	ID=Cli-Mir-32_3p*;Alias=MIMAT0038463
scaffold146	.	pre_miRNA	1338945	1339004	.	+	.	ID=Cli-Mir-33-P1_pre;Alias=MI0029938
scaffold146	.	miRNA	1338945	1338965	.	+	.	ID=Cli-Mir-33-P1_5p;Alias=MIMAT0038464
scaffold146	.	miRNA	1338984	1339004	.	+	.	ID=Cli-Mir-33-P1_3p*;Alias=MIMAT0038466
scaffold1086	.	pre_miRNA	144834	144894	.	-	.	ID=Cli-Mir-33-P3_pre;Alias=MI0029937
scaffold1086	.	miRNA	144874	144894	.	-	.	ID=Cli-Mir-33-P3_5p;Alias=MIMAT0038464
scaffold1086	.	miRNA	144834	144854	.	-	.	ID=Cli-Mir-33-P3_3p*;Alias=MIMAT0038465
scaffold693	.	pre_miRNA	1562325	1562390	.	+	.	ID=Cli-Mir-34-P1_pre;Alias=MI0029939
scaffold693	.	miRNA	1562325	1562347	.	+	.	ID=Cli-Mir-34-P1_5p;Alias=MIMAT0038467
scaffold693	.	miRNA	1562368	1562390	.	+	.	ID=Cli-Mir-34-P1_3p*;Alias=MIMAT0038468
scaffold77	.	pre_miRNA	2057114	2057172	.	+	.	ID=Cli-Mir-34-P2a_pre;Alias=MI0029940
scaffold77	.	miRNA	2057114	2057136	.	+	.	ID=Cli-Mir-34-P2a_5p;Alias=MIMAT0038469
scaffold77	.	miRNA	2057151	2057172	.	+	.	ID=Cli-Mir-34-P2a_3p*;Alias=MIMAT0038470
scaffold77	.	pre_miRNA	2057489	2057543	.	+	.	ID=Cli-Mir-34-P2b_pre;Alias=MI0029941
scaffold77	.	miRNA	2057489	2057511	.	+	.	ID=Cli-Mir-34-P2b_5p;Alias=MIMAT0038471
scaffold77	.	miRNA	2057522	2057543	.	+	.	ID=Cli-Mir-34-P2b_3p*;Alias=MIMAT0038472
scaffold22	.	pre_miRNA	2804282	2804344	.	-	.	ID=Cli-Mir-34-P3a_pre;Alias=MI0030044
scaffold22	.	miRNA	2804320	2804344	.	-	.	ID=Cli-Mir-34-P3a_5p;Alias=MIMAT0038639
scaffold22	.	miRNA	2804282	2804303	.	-	.	ID=Cli-Mir-34-P3a_3p*;Alias=MIMAT0038640
scaffold22	.	pre_miRNA	2803312	2803372	.	-	.	ID=Cli-Mir-34-P3b_pre;Alias=MI0030043
scaffold22	.	miRNA	2803348	2803372	.	-	.	ID=Cli-Mir-34-P3b_5p;Alias=MIMAT0038637
scaffold22	.	miRNA	2803312	2803331	.	-	.	ID=Cli-Mir-34-P3b_3p*;Alias=MIMAT0038638
scaffold22	.	pre_miRNA	2803153	2803209	.	-	.	ID=Cli-Mir-34-P3c_pre;Alias=MI0030042
scaffold22	.	miRNA	2803189	2803209	.	-	.	ID=Cli-Mir-34-P3c_5p;Alias=MIMAT0038636
scaffold22	.	miRNA	2803153	2803174	.	-	.	ID=Cli-Mir-34-P3c_3p*
scaffold22	.	pre_miRNA	2802157	2802215	.	-	.	ID=Cli-Mir-34-P3d_pre;Alias=MI0030045
scaffold22	.	miRNA	2802192	2802215	.	-	.	ID=Cli-Mir-34-P3d_5p;Alias=MIMAT0038641
scaffold22	.	miRNA	2802157	2802177	.	-	.	ID=Cli-Mir-34-P3d_3p*;Alias=MIMAT0038642
scaffold183	.	pre_miRNA	2837255	2837313	.	-	.	ID=Cli-Mir-92-P1a_pre;Alias=MI0029942
scaffold183	.	miRNA	2837291	2837313	.	-	.	ID=Cli-Mir-92-P1a_5p*;Alias=MIMAT0038473
scaffold183	.	miRNA	2837255	2837276	.	-	.	ID=Cli-Mir-92-P1a_3p;Alias=MIMAT0038474
scaffold72	.	pre_miRNA	3451822	3451883	.	-	.	ID=Cli-Mir-92-P1c_pre;Alias=MI0029943
scaffold72	.	miRNA	3451861	3451883	.	-	.	ID=Cli-Mir-92-P1c_5p*;Alias=MIMAT0038475
scaffold72	.	miRNA	3451822	3451843	.	-	.	ID=Cli-Mir-92-P1c_3p;Alias=MIMAT0038474
scaffold942	.	pre_miRNA	1626979	1627038	.	+	.	ID=Cli-Mir-92-P2a_pre;Alias=MI0030037
scaffold942	.	miRNA	1626979	1627000	.	+	.	ID=Cli-Mir-92-P2a_5p*
scaffold942	.	miRNA	1627017	1627038	.	+	.	ID=Cli-Mir-92-P2a_3p;Alias=MIMAT0038627
scaffold72	.	pre_miRNA	3451682	3451746	.	-	.	ID=Cli-Mir-92-P2c_pre;Alias=MI0030034
scaffold72	.	miRNA	3451724	3451746	.	-	.	ID=Cli-Mir-92-P2c_5p*;Alias=MIMAT0038622
scaffold72	.	miRNA	3451682	3451703	.	-	.	ID=Cli-Mir-92-P2c_3p;Alias=MIMAT0038623
scaffold121	.	pre_miRNA	1261712	1261775	.	+	.	ID=Cli-Mir-96-P1_pre;Alias=MI0029944
scaffold121	.	miRNA	1261712	1261734	.	+	.	ID=Cli-Mir-96-P1_5p;Alias=MIMAT0038476
scaffold121	.	miRNA	1261754	1261775	.	+	.	ID=Cli-Mir-96-P1_3p*;Alias=MIMAT0038477
scaffold121	.	pre_miRNA	1262259	1262323	.	+	.	ID=Cli-Mir-96-P2_pre;Alias=MI0029993
scaffold121	.	miRNA	1262259	1262282	.	+	.	ID=Cli-Mir-96-P2_5p;Alias=MIMAT0038556
scaffold121	.	miRNA	1262303	1262323	.	+	.	ID=Cli-Mir-96-P2_3p*;Alias=MIMAT0038557
scaffold121	.	pre_miRNA	1261591	1261652	.	+	.	ID=Cli-Mir-96-P3-v1_pre;Alias=MI0029994
scaffold121	.	miRNA	1261591	1261612	.	+	.	ID=Cli-Mir-96-P3-v1_5p;Alias=MIMAT0038558
scaffold121	.	miRNA	1261631	1261652	.	+	.	ID=Cli-Mir-96-P3-v1_3p*;Alias=MIMAT0038559
scaffold7	.	pre_miRNA	15720708	15720766	.	-	.	ID=Cli-Mir-101-P1-v1_pre;Alias=MI0029947
scaffold7	.	miRNA	15720745	15720766	.	-	.	ID=Cli-Mir-101-P1-v1_5p*;Alias=MIMAT0038482
scaffold7	.	miRNA	15720708	15720729	.	-	.	ID=Cli-Mir-101-P1-v1_3p;Alias=MIMAT0038483
scaffold6	.	pre_miRNA	3523034	3523092	.	-	.	ID=Cli-Mir-101-P2-v1_pre;Alias=MI0029948
scaffold6	.	miRNA	3523070	3523092	.	-	.	ID=Cli-Mir-101-P2-v1_5p*;Alias=MIMAT0038484
scaffold6	.	miRNA	3523034	3523055	.	-	.	ID=Cli-Mir-101-P2-v1_3p;Alias=MIMAT0038483
scaffold112	.	pre_miRNA	365368	365427	.	-	.	ID=Cli-Mir-103-P1_pre;Alias=MI0029952
scaffold112	.	miRNA	365405	365427	.	-	.	ID=Cli-Mir-103-P1_5p*;Alias=MIMAT0038489
scaffold112	.	miRNA	365368	365390	.	-	.	ID=Cli-Mir-103-P1_3p;Alias=MIMAT0038490
scaffold203	.	pre_miRNA	1112346	1112405	.	-	.	ID=Cli-Mir-103-P2_pre;Alias=MI0029950
scaffold203	.	miRNA	1112383	1112405	.	-	.	ID=Cli-Mir-103-P2_5p*;Alias=MIMAT0038486
scaffold203	.	miRNA	1112346	1112368	.	-	.	ID=Cli-Mir-103-P2_3p;Alias=MIMAT0038485
scaffold79	.	pre_miRNA	13537713	13537772	.	+	.	ID=Cli-Mir-103-P4_pre;Alias=MI0029949
scaffold79	.	miRNA	13537713	13537735	.	+	.	ID=Cli-Mir-103-P4_5p*
scaffold79	.	miRNA	13537750	13537772	.	+	.	ID=Cli-Mir-103-P4_3p;Alias=MIMAT0038485
scaffold1361	.	pre_miRNA	24153	24210	.	+	.	ID=Cli-Mir-122_pre;Alias=MI0029953
scaffold1361	.	miRNA	24153	24174	.	+	.	ID=Cli-Mir-122_5p;Alias=MIMAT0038491
scaffold1361	.	miRNA	24189	24210	.	+	.	ID=Cli-Mir-122_3p*;Alias=MIMAT0038492
scaffold195	.	pre_miRNA	1203220	1203278	.	-	.	ID=Cli-Mir-124-P1-v1_pre;Alias=MI0029954
scaffold195	.	miRNA	1203257	1203278	.	-	.	ID=Cli-Mir-124-P1-v1_5p*;Alias=MIMAT0038493
scaffold195	.	miRNA	1203220	1203241	.	-	.	ID=Cli-Mir-124-P1-v1_3p;Alias=MIMAT0038494
scaffold36	.	pre_miRNA	2496183	2496242	.	-	.	ID=Cli-Mir-124-P3-v1_pre;Alias=MI0029955
scaffold36	.	miRNA	2496221	2496242	.	-	.	ID=Cli-Mir-124-P3-v1_5p*;Alias=MIMAT0038495
scaffold36	.	miRNA	2496183	2496204	.	-	.	ID=Cli-Mir-124-P3-v1_3p;Alias=MIMAT0038494
scaffold642	.	pre_miRNA	1958266	1958324	.	-	.	ID=Cli-Mir-126-P2-v1_pre;Alias=MI0029958
scaffold642	.	miRNA	1958303	1958324	.	-	.	ID=Cli-Mir-126-P2-v1_5p*;Alias=MIMAT0038499
scaffold642	.	miRNA	1958266	1958287	.	-	.	ID=Cli-Mir-126-P2-v1_3p;Alias=MIMAT0038500
scaffold66	.	pre_miRNA	1465306	1465363	.	-	.	ID=Cli-Mir-128-P1_pre;Alias=MI0029960
scaffold66	.	miRNA	1465343	1465363	.	-	.	ID=Cli-Mir-128-P1_5p*;Alias=MIMAT0038502
scaffold66	.	miRNA	1465306	1465326	.	-	.	ID=Cli-Mir-128-P1_3p;Alias=MIMAT0038501
scaffold327	.	pre_miRNA	1216461	1216516	.	+	.	ID=Cli-Mir-128-P2_pre;Alias=MI0029959
scaffold327	.	miRNA	1216461	1216483	.	+	.	ID=Cli-Mir-128-P2_5p*
scaffold327	.	miRNA	1216496	1216516	.	+	.	ID=Cli-Mir-128-P2_3p;Alias=MIMAT0038501
scaffold121	.	pre_miRNA	1772002	1772066	.	-	.	ID=Cli-Mir-129-P2_pre;Alias=MI0029961
scaffold121	.	miRNA	1772046	1772066	.	-	.	ID=Cli-Mir-129-P2_5p;Alias=MIMAT0038503
scaffold121	.	miRNA	1772002	1772023	.	-	.	ID=Cli-Mir-129-P2_3p*;Alias=MIMAT0038504
scaffold1320	.	pre_miRNA	505488	505546	.	-	.	ID=Cli-Mir-130-P1a_pre;Alias=MI0029963
scaffold1320	.	miRNA	505525	505546	.	-	.	ID=Cli-Mir-130-P1a_5p*;Alias=MIMAT0038507
scaffold1320	.	miRNA	505488	505509	.	-	.	ID=Cli-Mir-130-P1a_3p;Alias=MIMAT0038508
scaffold580	.	pre_miRNA	630675	630737	.	+	.	ID=Cli-Mir-130-P1b_pre;Alias=MI0029962
scaffold580	.	miRNA	630675	630696	.	+	.	ID=Cli-Mir-130-P1b_5p*;Alias=MIMAT0038505
scaffold580	.	miRNA	630716	630737	.	+	.	ID=Cli-Mir-130-P1b_3p;Alias=MIMAT0038506
scaffold1320	.	pre_miRNA	504219	504281	.	-	.	ID=Cli-Mir-130-P2a_pre;Alias=MI0030027
scaffold1320	.	miRNA	504260	504281	.	-	.	ID=Cli-Mir-130-P2a_5p*;Alias=MIMAT0038613
scaffold1320	.	miRNA	504219	504243	.	-	.	ID=Cli-Mir-130-P2a_3p;Alias=MIMAT0038614
scaffold580	.	pre_miRNA	631257	631318	.	+	.	ID=Cli-Mir-130-P2b_pre;Alias=MI0030026
scaffold580	.	miRNA	631257	631278	.	+	.	ID=Cli-Mir-130-P2b_5p*;Alias=MIMAT0038611
scaffold580	.	miRNA	631294	631318	.	+	.	ID=Cli-Mir-130-P2b_3p;Alias=MIMAT0038612
scaffold1320	.	pre_miRNA	497731	497794	.	-	.	ID=Cli-Mir-130-P3a_pre;Alias=MI0030047
scaffold1320	.	miRNA	497772	497794	.	-	.	ID=Cli-Mir-130-P3a_5p*;Alias=MIMAT0038644
scaffold1320	.	miRNA	497731	497755	.	-	.	ID=Cli-Mir-130-P3a_3p;Alias=MIMAT0038645
scaffold23	.	pre_miRNA	295639	295698	.	-	.	ID=Cli-Mir-133-P1-v1_pre;Alias=MI0029964
scaffold23	.	miRNA	295676	295698	.	-	.	ID=Cli-Mir-133-P1-v1_5p*;Alias=MIMAT0038509
scaffold23	.	miRNA	295639	295661	.	-	.	ID=Cli-Mir-133-P1-v1_3p;Alias=MIMAT0038510
scaffold119	.	pre_miRNA	6659	6717	.	+	.	ID=Cli-Mir-133-P2-v1_pre;Alias=MI0029966
scaffold119	.	miRNA	6659	6680	.	+	.	ID=Cli-Mir-133-P2-v1_5p*;Alias=MIMAT0038511
scaffold119	.	miRNA	6696	6717	.	+	.	ID=Cli-Mir-133-P2-v1_3p;Alias=MIMAT0038512
scaffold36	.	pre_miRNA	3119758	3119817	.	-	.	ID=Cli-Mir-133-P3-v1_pre;Alias=MI0029965
scaffold36	.	miRNA	3119795	3119817	.	-	.	ID=Cli-Mir-133-P3-v1_5p*;Alias=MIMAT0038509
scaffold36	.	miRNA	3119758	3119780	.	-	.	ID=Cli-Mir-133-P3-v1_3p;Alias=MIMAT0038510
scaffold391	.	pre_miRNA	950891	950948	.	-	.	ID=Cli-Mir-133-P4-v1_pre
scaffold391	.	miRNA	950927	950948	.	-	.	ID=Cli-Mir-133-P4-v1_5p*
scaffold391	.	miRNA	950891	950912	.	-	.	ID=Cli-Mir-133-P4-v1_3p
scaffold335	.	pre_miRNA	781848	781908	.	-	.	ID=Cli-Mir-135-P1_pre;Alias=MI0029968
scaffold335	.	miRNA	781886	781908	.	-	.	ID=Cli-Mir-135-P1_5p;Alias=MIMAT0038514
scaffold335	.	miRNA	781848	781869	.	-	.	ID=Cli-Mir-135-P1_3p*;Alias=MIMAT0038515
scaffold557	.	pre_miRNA	971015	971074	.	-	.	ID=Cli-Mir-135-P2_pre;Alias=MI0029969
scaffold557	.	miRNA	971052	971074	.	-	.	ID=Cli-Mir-135-P2_5p;Alias=MIMAT0038514
scaffold557	.	miRNA	971015	971036	.	-	.	ID=Cli-Mir-135-P2_3p*;Alias=MIMAT0038516
scaffold176	.	pre_miRNA	178807	178867	.	+	.	ID=Cli-Mir-135-P4_pre;Alias=MI0029970
scaffold176	.	miRNA	178807	178829	.	+	.	ID=Cli-Mir-135-P4_5p;Alias=MIMAT0038514
scaffold176	.	miRNA	178846	178867	.	+	.	ID=Cli-Mir-135-P4_3p*;Alias=MIMAT0038517
scaffold7	.	pre_miRNA	3584717	3584775	.	-	.	ID=Cli-Mir-137-P1-v1_pre;Alias=MI0029971
scaffold7	.	miRNA	3584752	3584775	.	-	.	ID=Cli-Mir-137-P1-v1_5p*;Alias=MIMAT0038518
scaffold7	.	miRNA	3584717	3584739	.	-	.	ID=Cli-Mir-137-P1-v1_3p;Alias=MIMAT0038519
scaffold2489	.	pre_miRNA	3952	4009	.	-	.	ID=Cli-Mir-137-P3_pre;Alias=MI0029972
scaffold2489	.	miRNA	3986	4009	.	-	.	ID=Cli-Mir-137-P3_5p*;Alias=MIMAT0038520
scaffold2489	.	miRNA	3952	3974	.	-	.	ID=Cli-Mir-137-P3_3p;Alias=MIMAT0038521
scaffold380	.	pre_miRNA	712512	712572	.	+	.	ID=Cli-Mir-138-P1_pre;Alias=MI0029973
scaffold380	.	miRNA	712512	712534	.	+	.	ID=Cli-Mir-138-P1_5p;Alias=MIMAT0038522
scaffold380	.	miRNA	712552	712572	.	+	.	ID=Cli-Mir-138-P1_3p*;Alias=MIMAT0038523
scaffold123	.	pre_miRNA	10795004	10795071	.	+	.	ID=Cli-Mir-138-P2_pre;Alias=MI0029974
scaffold123	.	miRNA	10795004	10795026	.	+	.	ID=Cli-Mir-138-P2_5p;Alias=MIMAT0038522
scaffold123	.	miRNA	10795051	10795071	.	+	.	ID=Cli-Mir-138-P2_3p*;Alias=MIMAT0038524
scaffold1323	.	pre_miRNA	18345	18403	.	+	.	ID=Cli-Mir-139_pre;Alias=MI0029975
scaffold1323	.	miRNA	18345	18367	.	+	.	ID=Cli-Mir-139_5p;Alias=MIMAT0038525
scaffold1323	.	miRNA	18381	18403	.	+	.	ID=Cli-Mir-139_3p*;Alias=MIMAT0038526
scaffold123	.	pre_miRNA	5480472	5480533	.	-	.	ID=Cli-Mir-140-P2-v1_pre;Alias=MI0029976
scaffold123	.	miRNA	5480512	5480533	.	-	.	ID=Cli-Mir-140-P2-v1_5p*;Alias=MIMAT0038527
scaffold123	.	miRNA	5480472	5480493	.	-	.	ID=Cli-Mir-140-P2-v1_3p;Alias=MIMAT0038528
scaffold281	.	pre_miRNA	47104	47163	.	+	.	ID=Cli-Mir-142-P2-v1_pre;Alias=MI0029977
scaffold281	.	miRNA	47104	47124	.	+	.	ID=Cli-Mir-142-P2-v1_5p;Alias=MIMAT0038529
scaffold281	.	miRNA	47143	47163	.	+	.	ID=Cli-Mir-142-P2-v1_3p*;Alias=MIMAT0038530
scaffold395	.	pre_miRNA	918258	918312	.	+	.	ID=Cli-Mir-143_pre;Alias=MI0029978
scaffold395	.	miRNA	918258	918278	.	+	.	ID=Cli-Mir-143_5p*;Alias=MIMAT0038531
scaffold395	.	miRNA	918292	918312	.	+	.	ID=Cli-Mir-143_3p;Alias=MIMAT0038532
SRR516967	.	pre_miRNA	48	105	.	+	.	ID=Cli-Mir-144-v1_pre
SRR516967	.	miRNA	48	69	.	+	.	ID=Cli-Mir-144-v1_5p
SRR516967	.	miRNA	85	105	.	+	.	ID=Cli-Mir-144-v1_3p
scaffold395	.	pre_miRNA	918682	918741	.	+	.	ID=Cli-Mir-145_pre;Alias=MI0029979
scaffold395	.	miRNA	918682	918704	.	+	.	ID=Cli-Mir-145_5p;Alias=MIMAT0038533
scaffold395	.	miRNA	918720	918741	.	+	.	ID=Cli-Mir-145_3p*;Alias=MIMAT0038534
scaffold314	.	pre_miRNA	30548	30608	.	+	.	ID=Cli-Mir-146-P1_pre;Alias=MI0029981
scaffold314	.	miRNA	30548	30571	.	+	.	ID=Cli-Mir-146-P1_5p;Alias=MIMAT0038537
scaffold314	.	miRNA	30586	30608	.	+	.	ID=Cli-Mir-146-P1_3p*;Alias=MIMAT0038538
scaffold203	.	pre_miRNA	1412191	1412255	.	-	.	ID=Cli-Mir-146-P2_pre;Alias=MI0029982
scaffold203	.	miRNA	1412233	1412255	.	-	.	ID=Cli-Mir-146-P2_5p;Alias=MIMAT0038539
scaffold203	.	miRNA	1412191	1412212	.	-	.	ID=Cli-Mir-146-P2_3p*;Alias=MIMAT0038540
scaffold79	.	pre_miRNA	8894981	8895044	.	+	.	ID=Cli-Mir-146-P4_pre;Alias=MI0029980
scaffold79	.	miRNA	8894981	8895003	.	+	.	ID=Cli-Mir-146-P4_5p;Alias=MIMAT0038535
scaffold79	.	miRNA	8895023	8895044	.	+	.	ID=Cli-Mir-146-P4_3p*;Alias=MIMAT0038536
scaffold702	.	pre_miRNA	40106	40165	.	+	.	ID=Cli-Mir-147_pre;Alias=MI0029983
scaffold702	.	miRNA	40106	40128	.	+	.	ID=Cli-Mir-147_5p*
scaffold702	.	miRNA	40144	40165	.	+	.	ID=Cli-Mir-147_3p;Alias=MIMAT0038541
scaffold699	.	pre_miRNA	533825	533884	.	-	.	ID=Cli-Mir-148-P1_pre;Alias=MI0029984
scaffold699	.	miRNA	533863	533884	.	-	.	ID=Cli-Mir-148-P1_5p*;Alias=MIMAT0038542
scaffold699	.	miRNA	533825	533846	.	-	.	ID=Cli-Mir-148-P1_3p;Alias=MIMAT0038543
scaffold699	.	pre_miRNA	533827	533886	.	+	.	ID=Cli-Mir-148-P1-as_pre
scaffold699	.	miRNA	533827	533848	.	+	.	ID=Cli-Mir-148-P1-as_5p
scaffold699	.	miRNA	533865	533886	.	+	.	ID=Cli-Mir-148-P1-as_3p*
scaffold922	.	pre_miRNA	322361	322420	.	+	.	ID=Cli-Mir-148-P4_pre;Alias=MI0029985
scaffold922	.	miRNA	322361	322384	.	+	.	ID=Cli-Mir-148-P4_5p*
scaffold922	.	miRNA	322399	322420	.	+	.	ID=Cli-Mir-148-P4_3p;Alias=MIMAT0038544
scaffold337	.	pre_miRNA	193415	193475	.	-	.	ID=Cli-Mir-153-P1_pre;Alias=MI0029987
scaffold337	.	miRNA	193453	193475	.	-	.	ID=Cli-Mir-153-P1_5p*;Alias=MIMAT0038547
scaffold337	.	miRNA	193415	193436	.	-	.	ID=Cli-Mir-153-P1_3p;Alias=MIMAT0038548
scaffold32	.	pre_miRNA	1622023	1622081	.	-	.	ID=Cli-Mir-153-P2_pre;Alias=MI0029986
scaffold32	.	miRNA	1622061	1622081	.	-	.	ID=Cli-Mir-153-P2_5p*;Alias=MIMAT0038545
scaffold32	.	miRNA	1622023	1622044	.	-	.	ID=Cli-Mir-153-P2_3p;Alias=MIMAT0038546
scaffold101	.	pre_miRNA	7953883	7953943	.	-	.	ID=Cli-Mir-155_pre;Alias=MI0029988
scaffold101	.	miRNA	7953920	7953943	.	-	.	ID=Cli-Mir-155_5p;Alias=MIMAT0038549
scaffold101	.	miRNA	7953883	7953904	.	-	.	ID=Cli-Mir-155_3p*
scaffold7	.	pre_miRNA	7344755	7344816	.	+	.	ID=Cli-Mir-181-P1a_pre;Alias=MI0029989
scaffold7	.	miRNA	7344755	7344777	.	+	.	ID=Cli-Mir-181-P1a_5p;Alias=MIMAT0038550
scaffold7	.	miRNA	7344795	7344816	.	+	.	ID=Cli-Mir-181-P1a_3p*;Alias=MIMAT0038551
scaffold686	.	pre_miRNA	919231	919290	.	-	.	ID=Cli-Mir-181-P1b_pre;Alias=MI0029990
scaffold686	.	miRNA	919268	919290	.	-	.	ID=Cli-Mir-181-P1b_5p;Alias=MIMAT0038550
scaffold686	.	miRNA	919231	919252	.	-	.	ID=Cli-Mir-181-P1b_3p*;Alias=MIMAT0038552
scaffold7	.	pre_miRNA	7344940	7344999	.	+	.	ID=Cli-Mir-181-P2a_pre;Alias=MI0029991
scaffold7	.	miRNA	7344940	7344963	.	+	.	ID=Cli-Mir-181-P2a_5p;Alias=MIMAT0038553
scaffold7	.	miRNA	7344980	7344999	.	+	.	ID=Cli-Mir-181-P2a_3p*;Alias=MIMAT0038554
scaffold686	.	pre_miRNA	918309	918368	.	-	.	ID=Cli-Mir-181-P2b_pre;Alias=MI0029992
scaffold686	.	miRNA	918345	918368	.	-	.	ID=Cli-Mir-181-P2b_5p;Alias=MIMAT0038553
scaffold686	.	miRNA	918309	918330	.	-	.	ID=Cli-Mir-181-P2b_3p*;Alias=MIMAT0038555
scaffold506	.	pre_miRNA	3395665	3395726	.	-	.	ID=Cli-Mir-184_pre;Alias=MI0029995
scaffold506	.	miRNA	3395704	3395726	.	-	.	ID=Cli-Mir-184_5p*;Alias=MIMAT0038560
scaffold506	.	miRNA	3395665	3395686	.	-	.	ID=Cli-Mir-184_3p;Alias=MIMAT0038561
scaffold231	.	pre_miRNA	68271	68328	.	+	.	ID=Cli-Mir-187_pre;Alias=MI0029996
scaffold231	.	miRNA	68271	68292	.	+	.	ID=Cli-Mir-187_5p*;Alias=MIMAT0038562
scaffold231	.	miRNA	68307	68328	.	+	.	ID=Cli-Mir-187_3p;Alias=MIMAT0038563
scaffold87	.	pre_miRNA	1114482	1114540	.	-	.	ID=Cli-Mir-190-P1_pre
scaffold87	.	miRNA	1114517	1114540	.	-	.	ID=Cli-Mir-190-P1_5p
scaffold87	.	miRNA	1114482	1114504	.	-	.	ID=Cli-Mir-190-P1_3p*
scaffold54	.	pre_miRNA	1524407	1524465	.	-	.	ID=Cli-Mir-192-P2_pre;Alias=MI0030016
scaffold54	.	miRNA	1524444	1524465	.	-	.	ID=Cli-Mir-192-P2_5p;Alias=MIMAT0038594
scaffold54	.	miRNA	1524407	1524429	.	-	.	ID=Cli-Mir-192-P2_3p*;Alias=MIMAT0038595
scaffold251	.	pre_miRNA	987730	987788	.	+	.	ID=Cli-Mir-193-P1a_pre;Alias=MI0029998
scaffold251	.	miRNA	987730	987751	.	+	.	ID=Cli-Mir-193-P1a_5p*;Alias=MIMAT0038566
scaffold251	.	miRNA	987767	987788	.	+	.	ID=Cli-Mir-193-P1a_3p;Alias=MIMAT0038567
scaffold251	.	pre_miRNA	992954	993014	.	+	.	ID=Cli-Mir-193-P2a_pre;Alias=MI0030035
scaffold251	.	miRNA	992954	992976	.	+	.	ID=Cli-Mir-193-P2a_5p*;Alias=MIMAT0038624
scaffold251	.	miRNA	992994	993014	.	+	.	ID=Cli-Mir-193-P2a_3p;Alias=MIMAT0038625
scaffold111	.	pre_miRNA	348905	348967	.	-	.	ID=Cli-Mir-193-P2b_pre;Alias=MI0030036
scaffold111	.	miRNA	348945	348967	.	-	.	ID=Cli-Mir-193-P2b_5p*;Alias=MIMAT0038626
scaffold111	.	miRNA	348905	348926	.	-	.	ID=Cli-Mir-193-P2b_3p;Alias=MIMAT0038625
scaffold54	.	pre_miRNA	1524720	1524775	.	-	.	ID=Cli-Mir-194-P2_pre;Alias=MI0029999
scaffold54	.	miRNA	1524753	1524775	.	-	.	ID=Cli-Mir-194-P2_5p;Alias=MIMAT0038568
scaffold54	.	miRNA	1524720	1524741	.	-	.	ID=Cli-Mir-194-P2_3p*;Alias=MIMAT0038569
scaffold699	.	pre_miRNA	1139790	1139848	.	-	.	ID=Cli-Mir-196-P1_pre;Alias=MI0030002
scaffold699	.	miRNA	1139827	1139848	.	-	.	ID=Cli-Mir-196-P1_5p;Alias=MIMAT0038570
scaffold699	.	miRNA	1139790	1139811	.	-	.	ID=Cli-Mir-196-P1_3p*;Alias=MIMAT0038572
scaffold265	.	pre_miRNA	1508615	1508674	.	+	.	ID=Cli-Mir-196-P3_pre;Alias=MI0030000
scaffold265	.	miRNA	1508615	1508636	.	+	.	ID=Cli-Mir-196-P3_5p;Alias=MIMAT0038570
scaffold265	.	miRNA	1508653	1508674	.	+	.	ID=Cli-Mir-196-P3_3p*;Alias=MIMAT0038571
scaffold922	.	pre_miRNA	197745	197802	.	+	.	ID=Cli-Mir-196-P4_pre;Alias=MI0030001
scaffold922	.	miRNA	197745	197766	.	+	.	ID=Cli-Mir-196-P4_5p;Alias=MIMAT0038570
scaffold922	.	miRNA	197780	197802	.	+	.	ID=Cli-Mir-196-P4_3p*
scaffold7	.	pre_miRNA	10450277	10450337	.	+	.	ID=Cli-Mir-199-P1-v1_pre;Alias=MI0030003
scaffold7	.	miRNA	10450277	10450299	.	+	.	ID=Cli-Mir-199-P1-v1_5p*;Alias=MIMAT0038573
scaffold7	.	miRNA	10450316	10450337	.	+	.	ID=Cli-Mir-199-P1-v1_3p;Alias=MIMAT0038574
scaffold835	.	pre_miRNA	50412	50472	.	+	.	ID=Cli-Mir-199-P2-v1_pre;Alias=MI0030004
scaffold835	.	miRNA	50412	50434	.	+	.	ID=Cli-Mir-199-P2-v1_5p*;Alias=MIMAT0038573
scaffold835	.	miRNA	50451	50472	.	+	.	ID=Cli-Mir-199-P2-v1_3p;Alias=MIMAT0038574
scaffold262	.	pre_miRNA	1438281	1438338	.	+	.	ID=Cli-Mir-202_pre;Alias=MI0030007
scaffold262	.	miRNA	1438281	1438301	.	+	.	ID=Cli-Mir-202_5p;Alias=MIMAT0038579
scaffold262	.	miRNA	1438317	1438338	.	+	.	ID=Cli-Mir-202_3p*
scaffold506	.	pre_miRNA	653116	653173	.	+	.	ID=Cli-Mir-204-P1_pre;Alias=MI0030009
scaffold506	.	miRNA	653116	653137	.	+	.	ID=Cli-Mir-204-P1_5p;Alias=MIMAT0038580
scaffold506	.	miRNA	653153	653173	.	+	.	ID=Cli-Mir-204-P1_3p*;Alias=MIMAT0038582
scaffold148	.	pre_miRNA	920658	920717	.	+	.	ID=Cli-Mir-204-P2_pre;Alias=MI0030008
scaffold148	.	miRNA	920658	920679	.	+	.	ID=Cli-Mir-204-P2_5p;Alias=MIMAT0038580
scaffold148	.	miRNA	920697	920717	.	+	.	ID=Cli-Mir-204-P2_3p*;Alias=MIMAT0038581
scaffold194	.	pre_miRNA	1274466	1274522	.	+	.	ID=Cli-Mir-204-P4_pre;Alias=MI0030010
scaffold194	.	miRNA	1274466	1274487	.	+	.	ID=Cli-Mir-204-P4_5p;Alias=MIMAT0038580
scaffold194	.	miRNA	1274502	1274522	.	+	.	ID=Cli-Mir-204-P4_3p*;Alias=MIMAT0038583
scaffold121	.	pre_miRNA	707087	707145	.	+	.	ID=Cli-Mir-205-P2_pre
scaffold121	.	miRNA	707087	707108	.	+	.	ID=Cli-Mir-205-P2_5p
scaffold121	.	miRNA	707124	707145	.	+	.	ID=Cli-Mir-205-P2_3p*
scaffold454	.	pre_miRNA	2679550	2679609	.	+	.	ID=Cli-Mir-205-P4_pre;Alias=MI0030011
scaffold454	.	miRNA	2679550	2679571	.	+	.	ID=Cli-Mir-205-P4_5p;Alias=MIMAT0038584
scaffold454	.	miRNA	2679588	2679609	.	+	.	ID=Cli-Mir-205-P4_3p*;Alias=MIMAT0038585
scaffold346	.	pre_miRNA	1057671	1057731	.	-	.	ID=Cli-Mir-210_pre;Alias=MI0030014
scaffold346	.	miRNA	1057710	1057731	.	-	.	ID=Cli-Mir-210_5p*;Alias=MIMAT0038590
scaffold346	.	miRNA	1057671	1057692	.	-	.	ID=Cli-Mir-210_3p;Alias=MIMAT0038591
scaffold7	.	pre_miRNA	10456145	10456207	.	+	.	ID=Cli-Mir-214-v1_pre;Alias=MI0030015
scaffold7	.	miRNA	10456145	10456166	.	+	.	ID=Cli-Mir-214-v1_5p*;Alias=MIMAT0038592
scaffold7	.	miRNA	10456186	10456207	.	+	.	ID=Cli-Mir-214-v1_3p;Alias=MIMAT0038593
scaffold628	.	pre_miRNA	125966	126027	.	+	.	ID=Cli-Mir-216-P2a_pre;Alias=MI0030018
scaffold628	.	miRNA	125966	125987	.	+	.	ID=Cli-Mir-216-P2a_5p;Alias=MIMAT0038598
scaffold628	.	miRNA	126006	126027	.	+	.	ID=Cli-Mir-216-P2a_3p*;Alias=MIMAT0038599
scaffold628	.	pre_miRNA	130781	130841	.	+	.	ID=Cli-Mir-216-P2b_pre;Alias=MI0030017
scaffold628	.	miRNA	130781	130803	.	+	.	ID=Cli-Mir-216-P2b_5p;Alias=MIMAT0038596
scaffold628	.	miRNA	130820	130841	.	+	.	ID=Cli-Mir-216-P2b_3p*;Alias=MIMAT0038597
scaffold628	.	pre_miRNA	133577	133635	.	+	.	ID=Cli-Mir-217-v1_pre;Alias=MI0030019
scaffold628	.	miRNA	133577	133599	.	+	.	ID=Cli-Mir-217-v1_5p;Alias=MIMAT0038600
scaffold628	.	miRNA	133614	133635	.	+	.	ID=Cli-Mir-217-v1_3p*;Alias=MIMAT0038601
scaffold38	.	pre_miRNA	14206876	14206939	.	-	.	ID=Cli-Mir-218-P2_pre;Alias=MI0030020
scaffold38	.	miRNA	14206919	14206939	.	-	.	ID=Cli-Mir-218-P2_5p;Alias=MIMAT0038602
scaffold38	.	miRNA	14206876	14206896	.	-	.	ID=Cli-Mir-218-P2_3p*;Alias=MIMAT0038603
scaffold79	.	pre_miRNA	13392693	13392756	.	+	.	ID=Cli-Mir-218-P4_pre;Alias=MI0030021
scaffold79	.	miRNA	13392693	13392713	.	+	.	ID=Cli-Mir-218-P4_5p;Alias=MIMAT0038602
scaffold79	.	miRNA	13392736	13392756	.	+	.	ID=Cli-Mir-218-P4_3p*;Alias=MIMAT0038603
scaffold2035	.	pre_miRNA	7056	7122	.	+	.	ID=Cli-Mir-219-P2_pre
scaffold2035	.	miRNA	7056	7078	.	+	.	ID=Cli-Mir-219-P2_5p
scaffold2035	.	miRNA	7101	7122	.	+	.	ID=Cli-Mir-219-P2_3p
scaffold68	.	pre_miRNA	1295199	1295261	.	+	.	ID=Cli-Mir-221-P1a_pre;Alias=MI0030023
scaffold68	.	miRNA	1295199	1295221	.	+	.	ID=Cli-Mir-221-P1a_5p*;Alias=MIMAT0038606
scaffold68	.	miRNA	1295238	1295261	.	+	.	ID=Cli-Mir-221-P1a_3p;Alias=MIMAT0038607
scaffold72	.	pre_miRNA	1257573	1257639	.	+	.	ID=Cli-Mir-221-P1c_pre;Alias=MI0030024
scaffold72	.	miRNA	1257573	1257595	.	+	.	ID=Cli-Mir-221-P1c_5p*
scaffold72	.	miRNA	1257616	1257639	.	+	.	ID=Cli-Mir-221-P1c_3p;Alias=MIMAT0038608
scaffold68	.	pre_miRNA	1295720	1295782	.	+	.	ID=Cli-Mir-221-P2a_pre;Alias=MI0030022
scaffold68	.	miRNA	1295720	1295742	.	+	.	ID=Cli-Mir-221-P2a_5p*;Alias=MIMAT0038604
scaffold68	.	miRNA	1295760	1295782	.	+	.	ID=Cli-Mir-221-P2a_3p;Alias=MIMAT0038605
scaffold375	.	pre_miRNA	204610	204672	.	+	.	ID=Cli-Mir-223_pre;Alias=MI0030025
scaffold375	.	miRNA	204610	204632	.	+	.	ID=Cli-Mir-223_5p*;Alias=MIMAT0038609
scaffold375	.	miRNA	204650	204672	.	+	.	ID=Cli-Mir-223_3p;Alias=MIMAT0038610
scaffold1084	.	pre_miRNA	334966	335025	.	+	.	ID=Cli-Mir-338-P1_pre;Alias=MI0030032
scaffold1084	.	miRNA	334966	334990	.	+	.	ID=Cli-Mir-338-P1_5p*;Alias=MIMAT0038618
scaffold1084	.	miRNA	335003	335025	.	+	.	ID=Cli-Mir-338-P1_3p;Alias=MIMAT0038619
scaffold331	.	pre_miRNA	82791	82851	.	+	.	ID=Cli-Mir-338-P2_pre;Alias=MI0030033
scaffold331	.	miRNA	82791	82811	.	+	.	ID=Cli-Mir-338-P2_5p*;Alias=MIMAT0038620
scaffold331	.	miRNA	82829	82851	.	+	.	ID=Cli-Mir-338-P2_3p;Alias=MIMAT0038621
scaffold32	.	pre_miRNA	1406275	1406332	.	-	.	ID=Cli-Mir-375_pre;Alias=MI0030038
scaffold32	.	miRNA	1406310	1406332	.	-	.	ID=Cli-Mir-375_5p*;Alias=MIMAT0038628
scaffold32	.	miRNA	1406275	1406296	.	-	.	ID=Cli-Mir-375_3p;Alias=MIMAT0038629
scaffold38	.	pre_miRNA	1608644	1608705	.	+	.	ID=Cli-Mir-383-v1_pre;Alias=MI0030039
scaffold38	.	miRNA	1608644	1608665	.	+	.	ID=Cli-Mir-383-v1_5p;Alias=MIMAT0038630
scaffold38	.	miRNA	1608685	1608705	.	+	.	ID=Cli-Mir-383-v1_3p*;Alias=MIMAT0038631
scaffold277	.	pre_miRNA	2757276	2757337	.	+	.	ID=Cli-Mir-425_pre;Alias=MI0030040
scaffold277	.	miRNA	2757276	2757300	.	+	.	ID=Cli-Mir-425_5p;Alias=MIMAT0038632
scaffold277	.	miRNA	2757315	2757337	.	+	.	ID=Cli-Mir-425_3p*;Alias=MIMAT0038633
scaffold942	.	pre_miRNA	1626026	1626086	.	+	.	ID=Cli-Mir-430-P1_pre;Alias=MI0030029
scaffold942	.	miRNA	1626026	1626048	.	+	.	ID=Cli-Mir-430-P1_5p*
scaffold942	.	miRNA	1626064	1626086	.	+	.	ID=Cli-Mir-430-P1_3p;Alias=MIMAT0038616
scaffold942	.	pre_miRNA	1626310	1626366	.	+	.	ID=Cli-Mir-430-P2_pre;Alias=MI0030031
scaffold942	.	miRNA	1626310	1626332	.	+	.	ID=Cli-Mir-430-P2_5p*
scaffold942	.	miRNA	1626344	1626366	.	+	.	ID=Cli-Mir-430-P2_3p;Alias=MIMAT0038617
scaffold942	.	pre_miRNA	1626451	1626510	.	+	.	ID=Cli-Mir-430-P3_pre;Alias=MI0030028
scaffold942	.	miRNA	1626451	1626473	.	+	.	ID=Cli-Mir-430-P3_5p*
scaffold942	.	miRNA	1626488	1626510	.	+	.	ID=Cli-Mir-430-P3_3p;Alias=MIMAT0038615
scaffold942	.	pre_miRNA	1626806	1626867	.	+	.	ID=Cli-Mir-430-P4_pre;Alias=MI0030030
scaffold942	.	miRNA	1626806	1626828	.	+	.	ID=Cli-Mir-430-P4_5p*
scaffold942	.	miRNA	1626845	1626867	.	+	.	ID=Cli-Mir-430-P4_3p;Alias=MIMAT0038616
scaffold94	.	pre_miRNA	3184914	3184955	.	-	.	ID=Cli-Mir-451_pre;Alias=MI0030046
scaffold94	.	miRNA	3184934	3184955	.	-	.	ID=Cli-Mir-451_5p;Alias=MIMAT0038643
scaffold955	.	pre_miRNA	271163	271220	.	-	.	ID=Cli-Mir-455-v1_pre;Alias=MI0030048
scaffold955	.	miRNA	271199	271220	.	-	.	ID=Cli-Mir-455-v1_5p;Alias=MIMAT0038646
scaffold955	.	miRNA	271163	271184	.	-	.	ID=Cli-Mir-455-v1_3p*;Alias=MIMAT0038647
scaffold109	.	pre_miRNA	2388553	2388613	.	+	.	ID=Cli-Mir-456_pre;Alias=MI0030049
scaffold109	.	miRNA	2388553	2388574	.	+	.	ID=Cli-Mir-456_5p*
scaffold109	.	miRNA	2388593	2388613	.	+	.	ID=Cli-Mir-456_3p;Alias=MIMAT0038648
scaffold636	.	pre_miRNA	126032	126089	.	+	.	ID=Cli-Mir-458_pre;Alias=MI0030050
scaffold636	.	miRNA	126032	126053	.	+	.	ID=Cli-Mir-458_5p*;Alias=MIMAT0038649
scaffold636	.	miRNA	126068	126089	.	+	.	ID=Cli-Mir-458_3p;Alias=MIMAT0038650
scaffold636	.	pre_miRNA	126030	126087	.	-	.	ID=Cli-Mir-458-as_pre
scaffold636	.	miRNA	126066	126087	.	-	.	ID=Cli-Mir-458-as_5p*
scaffold636	.	miRNA	126030	126051	.	-	.	ID=Cli-Mir-458-as_3p
scaffold101	.	pre_miRNA	3576180	3576240	.	-	.	ID=Cli-Mir-459_pre;Alias=MI0030051
scaffold101	.	miRNA	3576217	3576240	.	-	.	ID=Cli-Mir-459_5p;Alias=MIMAT0038651
scaffold101	.	miRNA	3576180	3576202	.	-	.	ID=Cli-Mir-459_3p*
scaffold517	.	pre_miRNA	1526048	1526106	.	+	.	ID=Cli-Mir-460-P1_pre
scaffold517	.	miRNA	1526048	1526069	.	+	.	ID=Cli-Mir-460-P1_5p
scaffold517	.	miRNA	1526085	1526106	.	+	.	ID=Cli-Mir-460-P1_3p*
scaffold72	.	pre_miRNA	1902296	1902352	.	+	.	ID=Cli-Mir-460-P2_pre
scaffold72	.	miRNA	1902296	1902317	.	+	.	ID=Cli-Mir-460-P2_5p
scaffold72	.	miRNA	1902331	1902352	.	+	.	ID=Cli-Mir-460-P2_3p*
scaffold169	.	pre_miRNA	1811717	1811776	.	+	.	ID=Cli-Mir-489-v1_pre;Alias=MI0030054
scaffold169	.	miRNA	1811717	1811738	.	+	.	ID=Cli-Mir-489-v1_5p*;Alias=MIMAT0038656
scaffold169	.	miRNA	1811755	1811776	.	+	.	ID=Cli-Mir-489-v1_3p;Alias=MIMAT0038657
scaffold334	.	pre_miRNA	335624	335685	.	-	.	ID=Cli-Mir-490_pre
scaffold334	.	miRNA	335666	335685	.	-	.	ID=Cli-Mir-490_5p*
scaffold334	.	miRNA	335624	335646	.	-	.	ID=Cli-Mir-490_3p
scaffold100	.	pre_miRNA	2000109	2000168	.	-	.	ID=Cli-Mir-499_pre;Alias=MI0030056
scaffold100	.	miRNA	2000147	2000168	.	-	.	ID=Cli-Mir-499_5p;Alias=MIMAT0038660
scaffold100	.	miRNA	2000109	2000130	.	-	.	ID=Cli-Mir-499_3p*;Alias=MIMAT0038661
scaffold693	.	pre_miRNA	3837059	3837117	.	-	.	ID=Cli-Mir-551-P1_pre;Alias=MI0030057
scaffold693	.	miRNA	3837095	3837117	.	-	.	ID=Cli-Mir-551-P1_5p*;Alias=MIMAT0038662
scaffold693	.	miRNA	3837059	3837079	.	-	.	ID=Cli-Mir-551-P1_3p;Alias=MIMAT0038663
scaffold698	.	pre_miRNA	3540893	3540953	.	-	.	ID=Cli-Mir-551-P2_pre;Alias=MI0030058
scaffold698	.	miRNA	3540931	3540953	.	-	.	ID=Cli-Mir-551-P2_5p*;Alias=MIMAT0038664
scaffold698	.	miRNA	3540893	3540913	.	-	.	ID=Cli-Mir-551-P2_3p;Alias=MIMAT0038665
scaffold1	.	pre_miRNA	1574686	1574745	.	+	.	ID=Cli-Mir-599_pre;Alias=MI0030059
scaffold1	.	miRNA	1574686	1574706	.	+	.	ID=Cli-Mir-599_5p*
scaffold1	.	miRNA	1574724	1574745	.	+	.	ID=Cli-Mir-599_3p;Alias=MIMAT0038666
scaffold244	.	pre_miRNA	3380836	3380896	.	-	.	ID=Cli-Mir-737_pre;Alias=MI0030060
scaffold244	.	miRNA	3380875	3380896	.	-	.	ID=Cli-Mir-737_5p;Alias=MIMAT0038667
scaffold244	.	miRNA	3380836	3380857	.	-	.	ID=Cli-Mir-737_3p*
scaffold1	.	pre_miRNA	1574523	1574579	.	+	.	ID=Cli-Mir-875_pre;Alias=MI0030061
scaffold1	.	miRNA	1574523	1574544	.	+	.	ID=Cli-Mir-875_5p;Alias=MIMAT0038668
scaffold1	.	miRNA	1574558	1574579	.	+	.	ID=Cli-Mir-875_3p*;Alias=MIMAT0038669
scaffold20	.	pre_miRNA	625489	625549	.	+	.	ID=Cli-Mir-1306_pre
scaffold20	.	miRNA	625489	625510	.	+	.	ID=Cli-Mir-1306_5p
scaffold20	.	miRNA	625528	625549	.	+	.	ID=Cli-Mir-1306_3p*
scaffold102	.	pre_miRNA	20718008	20718068	.	+	.	ID=Cli-Mir-1329-v1_pre;Alias=MI0030063
scaffold102	.	miRNA	20718008	20718030	.	+	.	ID=Cli-Mir-1329-v1_5p;Alias=MIMAT0038672
scaffold102	.	miRNA	20718047	20718068	.	+	.	ID=Cli-Mir-1329-v1_3p*;Alias=MIMAT0038673
scaffold36	.	pre_miRNA	1588269	1588329	.	-	.	ID=Cli-Mir-1388_pre;Alias=MI0030064
scaffold36	.	miRNA	1588308	1588329	.	-	.	ID=Cli-Mir-1388_5p;Alias=MIMAT0038674
scaffold36	.	miRNA	1588269	1588290	.	-	.	ID=Cli-Mir-1388_3p*;Alias=MIMAT0038675
scaffold148	.	pre_miRNA	1182294	1182352	.	-	.	ID=Cli-Mir-1416_pre;Alias=MI0030065
scaffold148	.	miRNA	1182331	1182352	.	-	.	ID=Cli-Mir-1416_5p;Alias=MIMAT0038676
scaffold148	.	miRNA	1182294	1182315	.	-	.	ID=Cli-Mir-1416_3p*;Alias=MIMAT0038677
scaffold99	.	pre_miRNA	1351156	1351214	.	+	.	ID=Cli-Mir-1451_pre;Alias=MI0030066
scaffold99	.	miRNA	1351156	1351177	.	+	.	ID=Cli-Mir-1451_5p;Alias=MIMAT0038678
scaffold99	.	miRNA	1351193	1351214	.	+	.	ID=Cli-Mir-1451_3p*;Alias=MIMAT0038679
scaffold216	.	pre_miRNA	4187745	4187809	.	-	.	ID=Cli-Mir-1467_pre;Alias=MI0030067
scaffold216	.	miRNA	4187787	4187809	.	-	.	ID=Cli-Mir-1467_5p*;Alias=MIMAT0038680
scaffold216	.	miRNA	4187745	4187767	.	-	.	ID=Cli-Mir-1467_3p;Alias=MIMAT0038681
scaffold160	.	pre_miRNA	1494072	1494129	.	-	.	ID=Cli-Mir-1552_pre;Alias=MI0030069
scaffold160	.	miRNA	1494107	1494129	.	-	.	ID=Cli-Mir-1552_5p;Alias=MIMAT0038683
scaffold160	.	miRNA	1494072	1494093	.	-	.	ID=Cli-Mir-1552_3p;Alias=MIMAT0038684
scaffold159	.	pre_miRNA	524666	524725	.	-	.	ID=Cli-Mir-1559_pre;Alias=MI0030070
scaffold159	.	miRNA	524704	524725	.	-	.	ID=Cli-Mir-1559_5p;Alias=MIMAT0038685
scaffold159	.	miRNA	524666	524687	.	-	.	ID=Cli-Mir-1559_3p*;Alias=MIMAT0038686
scaffold490	.	pre_miRNA	1454677	1454735	.	-	.	ID=Cli-Mir-1641_pre;Alias=MI0030071
scaffold490	.	miRNA	1454714	1454735	.	-	.	ID=Cli-Mir-1641_5p;Alias=MIMAT0038687
scaffold490	.	miRNA	1454677	1454698	.	-	.	ID=Cli-Mir-1641_3p*
scaffold450	.	pre_miRNA	607999	608056	.	-	.	ID=Cli-Mir-1662_pre;Alias=MI0030073
scaffold450	.	miRNA	608035	608056	.	-	.	ID=Cli-Mir-1662_5p;Alias=MIMAT0038689
scaffold450	.	miRNA	607999	608020	.	-	.	ID=Cli-Mir-1662_3p*;Alias=MIMAT0038690
scaffold1299	.	pre_miRNA	480160	480216	.	+	.	ID=Cli-Mir-1677-P1_pre;Alias=MI0030074
scaffold1299	.	miRNA	480160	480181	.	+	.	ID=Cli-Mir-1677-P1_5p*;Alias=MIMAT0038691
scaffold1299	.	miRNA	480194	480216	.	+	.	ID=Cli-Mir-1677-P1_3p;Alias=MIMAT0038692
scaffold309	.	pre_miRNA	1394353	1394414	.	+	.	ID=Cli-Mir-1677-P2_pre
scaffold309	.	miRNA	1394353	1394374	.	+	.	ID=Cli-Mir-1677-P2_5p*
scaffold309	.	miRNA	1394393	1394414	.	+	.	ID=Cli-Mir-1677-P2_3p
scaffold232	.	pre_miRNA	10503091	10503148	.	-	.	ID=Cli-Mir-1677-P4_pre;Alias=MI0030079
scaffold232	.	miRNA	10503126	10503148	.	-	.	ID=Cli-Mir-1677-P4_5p*;Alias=MIMAT0038699
scaffold232	.	miRNA	10503091	10503112	.	-	.	ID=Cli-Mir-1677-P4_3p
scaffold173	.	pre_miRNA	2790627	2790680	.	+	.	ID=Cli-Mir-1677-P5_pre;Alias=MI0030082
scaffold173	.	miRNA	2790627	2790647	.	+	.	ID=Cli-Mir-1677-P5_5p*;Alias=MIMAT0038703
scaffold173	.	miRNA	2790660	2790680	.	+	.	ID=Cli-Mir-1677-P5_3p;Alias=MIMAT0038704
scaffold231	.	pre_miRNA	75600	75657	.	+	.	ID=Cli-Mir-1677-P6_pre
scaffold231	.	miRNA	75600	75622	.	+	.	ID=Cli-Mir-1677-P6_5p*
scaffold231	.	miRNA	75635	75657	.	+	.	ID=Cli-Mir-1677-P6_3p
scaffold150	.	pre_miRNA	999054	999114	.	-	.	ID=Cli-Mir-1720_pre;Alias=MI0030075
scaffold150	.	miRNA	999091	999114	.	-	.	ID=Cli-Mir-1720_5p*;Alias=MIMAT0038693
scaffold150	.	miRNA	999054	999076	.	-	.	ID=Cli-Mir-1720_3p;Alias=MIMAT0038694
scaffold20	.	pre_miRNA	27908	27969	.	+	.	ID=Cli-Mir-1729_pre;Alias=MI0030076
scaffold20	.	miRNA	27908	27930	.	+	.	ID=Cli-Mir-1729_5p;Alias=MIMAT0038695
scaffold20	.	miRNA	27948	27969	.	+	.	ID=Cli-Mir-1729_3p;Alias=MIMAT0038696
scaffold146	.	pre_miRNA	3197333	3197391	.	+	.	ID=Cli-Mir-1781_pre;Alias=MI0030077
scaffold146	.	miRNA	3197333	3197353	.	+	.	ID=Cli-Mir-1781_5p*
scaffold146	.	miRNA	3197371	3197391	.	+	.	ID=Cli-Mir-1781_3p;Alias=MIMAT0038697
scaffold32	.	pre_miRNA	1391518	1391576	.	-	.	ID=Cli-Mir-1788_pre;Alias=MI0030080
scaffold32	.	miRNA	1391555	1391576	.	-	.	ID=Cli-Mir-1788_5p*;Alias=MIMAT0038700
scaffold32	.	miRNA	1391518	1391538	.	-	.	ID=Cli-Mir-1788_3p;Alias=MIMAT0038701
scaffold31	.	pre_miRNA	6825942	6826002	.	-	.	ID=Cli-Mir-1805_pre;Alias=MI0030084
scaffold31	.	miRNA	6825982	6826002	.	-	.	ID=Cli-Mir-1805_5p*;Alias=MIMAT0038705
scaffold31	.	miRNA	6825942	6825963	.	-	.	ID=Cli-Mir-1805_3p;Alias=MIMAT0038706
scaffold476	.	pre_miRNA	26740	26804	.	-	.	ID=Cli-Mir-2131_pre;Alias=MI0030085
scaffold476	.	miRNA	26781	26804	.	-	.	ID=Cli-Mir-2131_5p;Alias=MIMAT0038707
scaffold476	.	miRNA	26740	26760	.	-	.	ID=Cli-Mir-2131_3p;Alias=MIMAT0038708
scaffold497	.	pre_miRNA	1693231	1693290	.	-	.	ID=Cli-Mir-2188_pre;Alias=MI0030086
scaffold497	.	miRNA	1693269	1693290	.	-	.	ID=Cli-Mir-2188_5p;Alias=MIMAT0038709
scaffold497	.	miRNA	1693231	1693252	.	-	.	ID=Cli-Mir-2188_3p*;Alias=MIMAT0038710
scaffold476	.	pre_miRNA	14816	14876	.	+	.	ID=Cli-Mir-2954_pre;Alias=MI0030087
scaffold476	.	miRNA	14816	14839	.	+	.	ID=Cli-Mir-2954_5p*;Alias=MIMAT0038711
scaffold476	.	miRNA	14854	14876	.	+	.	ID=Cli-Mir-2954_3p;Alias=MIMAT0038712
scaffold277	.	pre_miRNA	2757543	2757601	.	+	.	ID=Cli-Mir-2970_pre;Alias=MI0030088
scaffold277	.	miRNA	2757543	2757564	.	+	.	ID=Cli-Mir-2970_5p;Alias=MIMAT0038713
scaffold277	.	miRNA	2757580	2757601	.	+	.	ID=Cli-Mir-2970_3p*;Alias=MIMAT0038714
scaffold167	.	pre_miRNA	918738	918804	.	+	.	ID=Cli-Mir-2984_pre;Alias=MI0030089
scaffold167	.	miRNA	918738	918759	.	+	.	ID=Cli-Mir-2984_5p;Alias=MIMAT0038715
scaffold167	.	miRNA	918783	918804	.	+	.	ID=Cli-Mir-2984_3p*
scaffold274	.	pre_miRNA	1774180	1774241	.	-	.	ID=Cli-Mir-7463_pre
scaffold274	.	miRNA	1774220	1774241	.	-	.	ID=Cli-Mir-7463_5p*
scaffold274	.	miRNA	1774180	1774201	.	-	.	ID=Cli-Mir-7463_3p
scaffold32	.	pre_miRNA	1124437	1124505	.	-	.	ID=Cli-Mir-9616_pre;Alias=MI0030093
scaffold32	.	miRNA	1124483	1124505	.	-	.	ID=Cli-Mir-9616_5p*;Alias=MIMAT0038721
scaffold32	.	miRNA	1124437	1124457	.	-	.	ID=Cli-Mir-9616_3p;Alias=MIMAT0038722
scaffold7	.	pre_miRNA	6214561	6214617	.	-	.	ID=Cli-Mir-9619_pre;Alias=MI0030096
scaffold7	.	miRNA	6214596	6214617	.	-	.	ID=Cli-Mir-9619_5p*;Alias=MIMAT0038727
scaffold7	.	miRNA	6214561	6214582	.	-	.	ID=Cli-Mir-9619_3p;Alias=MIMAT0038728
scaffold123	.	pre_miRNA	6395738	6395795	.	-	.	ID=Cli-Mir-9621_pre;Alias=MI0030098
scaffold123	.	miRNA	6395774	6395795	.	-	.	ID=Cli-Mir-9621_5p;Alias=MIMAT0038731
scaffold123	.	miRNA	6395738	6395759	.	-	.	ID=Cli-Mir-9621_3p*;Alias=MIMAT0038732
scaffold79	.	pre_miRNA	5422822	5422880	.	+	.	ID=Cli-Mir-9622_pre;Alias=MI0030101
scaffold79	.	miRNA	5422822	5422843	.	+	.	ID=Cli-Mir-9622_5p*;Alias=MIMAT0038735
scaffold79	.	miRNA	5422859	5422880	.	+	.	ID=Cli-Mir-9622_3p;Alias=MIMAT0038736
scaffold93	.	pre_miRNA	1928134	1928192	.	-	.	ID=Cli-Mir-9623_pre;Alias=MI0030102
scaffold93	.	miRNA	1928171	1928192	.	-	.	ID=Cli-Mir-9623_5p*;Alias=MIMAT0038737
scaffold93	.	miRNA	1928134	1928155	.	-	.	ID=Cli-Mir-9623_3p;Alias=MIMAT0038738
scaffold693	.	pre_miRNA	1982645	1982702	.	-	.	ID=Cli-Mir-9625_pre;Alias=MI0030104
scaffold693	.	miRNA	1982680	1982702	.	-	.	ID=Cli-Mir-9625_5p;Alias=MIMAT0038741
scaffold693	.	miRNA	1982645	1982665	.	-	.	ID=Cli-Mir-9625_3p*;Alias=MIMAT0038742
scaffold240	.	pre_miRNA	123101	123158	.	+	.	ID=Cli-Mir-9627_pre;Alias=MI0030106
scaffold240	.	miRNA	123101	123122	.	+	.	ID=Cli-Mir-9627_5p*;Alias=MIMAT0038745
scaffold240	.	miRNA	123137	123158	.	+	.	ID=Cli-Mir-9627_3p;Alias=MIMAT0038746
scaffold87	.	pre_miRNA	2262197	2262257	.	+	.	ID=Cli-Mir-9631_pre;Alias=MI0030110
scaffold87	.	miRNA	2262197	2262220	.	+	.	ID=Cli-Mir-9631_5p;Alias=MIMAT0038753
scaffold87	.	miRNA	2262235	2262257	.	+	.	ID=Cli-Mir-9631_3p;Alias=MIMAT0038754
scaffold87	.	pre_miRNA	761143	761206	.	-	.	ID=Cli-Mir-9633_pre;Alias=MI0030112
scaffold87	.	miRNA	761186	761206	.	-	.	ID=Cli-Mir-9633_5p;Alias=MIMAT0038757
scaffold87	.	miRNA	761143	761165	.	-	.	ID=Cli-Mir-9633_3p*;Alias=MIMAT0038758
scaffold38	.	pre_miRNA	7984739	7984802	.	-	.	ID=Cli-Mir-9634_pre;Alias=MI0030114
scaffold38	.	miRNA	7984779	7984802	.	-	.	ID=Cli-Mir-9634_5p;Alias=MIMAT0038761
scaffold38	.	miRNA	7984739	7984759	.	-	.	ID=Cli-Mir-9634_3p;Alias=MIMAT0038762
scaffold1590	.	pre_miRNA	232480	232547	.	+	.	ID=Cli-Mir-9636_pre;Alias=MI0030116
scaffold1590	.	miRNA	232480	232503	.	+	.	ID=Cli-Mir-9636_5p;Alias=MIMAT0038765
scaffold1590	.	miRNA	232526	232547	.	+	.	ID=Cli-Mir-9636_3p;Alias=MIMAT0038766
scaffold684	.	pre_miRNA	20874	20935	.	+	.	ID=Cli-Mir-9640_pre;Alias=MI0030120
scaffold684	.	miRNA	20874	20895	.	+	.	ID=Cli-Mir-9640_5p*;Alias=MIMAT0038773
scaffold684	.	miRNA	20913	20935	.	+	.	ID=Cli-Mir-9640_3p;Alias=MIMAT0038774
scaffold182	.	pre_miRNA	66204	66259	.	+	.	ID=Cli-Mir-9643_pre;Alias=MI0030123
scaffold182	.	miRNA	66204	66225	.	+	.	ID=Cli-Mir-9643_5p*;Alias=MIMAT0038779
scaffold182	.	miRNA	66238	66259	.	+	.	ID=Cli-Mir-9643_3p;Alias=MIMAT0038780
scaffold101	.	pre_miRNA	12247024	12247081	.	+	.	ID=Cli-Mir-9644_pre;Alias=MI0030124
scaffold101	.	miRNA	12247024	12247046	.	+	.	ID=Cli-Mir-9644_5p;Alias=MIMAT0038781
scaffold101	.	miRNA	12247059	12247081	.	+	.	ID=Cli-Mir-9644_3p*;Alias=MIMAT0038782
scaffold10	.	pre_miRNA	3459174	3459228	.	-	.	ID=Cli-Mir-9646_pre;Alias=MI0030126
scaffold10	.	miRNA	3459207	3459228	.	-	.	ID=Cli-Mir-9646_5p*;Alias=MIMAT0038785
scaffold10	.	miRNA	3459174	3459195	.	-	.	ID=Cli-Mir-9646_3p;Alias=MIMAT0038786
scaffold226	.	pre_miRNA	298722	298780	.	-	.	ID=Cli-Mir-9648_pre;Alias=MI0030128
scaffold226	.	miRNA	298760	298780	.	-	.	ID=Cli-Mir-9648_5p;Alias=MIMAT0038789
scaffold226	.	miRNA	298722	298742	.	-	.	ID=Cli-Mir-9648_3p;Alias=MIMAT0038790