MirGeneDB 2.1

46 Xenoturbella bocki microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To To To
Xbo-Mir-1 None MIR-1 GGAAUGU None None 3C-assembly_contig_1669 20736 20795 - Bilateria Bilateria No 1 1
Xbo-Mir-33 None MIR-33 UGCAUUG None None 3C-assembly_contig_1895 65726 65783 - X. bocki Bilateria Unknown 1 1 1
Xbo-Mir-153 None MIR-153 UGCAUAG None None 3C-assembly_contig_1898 3598015 3598075 - Bilateria Bilateria No 1 1 1
Xbo-Let-7 None LET-7 GAGGUAG None None 3C-assembly_contig_1897 2777546 2777611 - Bilateria Bilateria Unknown 1
Xbo-Mir-252-P1h None MIR-252 UAAGUAG None None 3C-assembly_contig_130 2053 2112 + X. bocki Bilateria None 1 1 1
Xbo-Mir-92-o90 None MIR-92 AUUGCAC None None 3C-assembly_contig_1891 1630812 1630872 + X. bocki Bilateria None 1 1 1
Xbo-Novel-8 None XBO-NOVEL-8 GUAGGGU None None 3C-assembly_contig_1900 4091582 4091640 + X. bocki X. bocki No 1 1
Xbo-Mir-9 None MIR-9 CUUUGGU None None 3C-assembly_contig_1897 2227844 2227904 + Bilateria Bilateria No 1
Xbo-Mir-137 xbo-mir-137 MIR-137 UAUUGCU None MIMAT0020121 3C-assembly_contig_1893 552746 552805 - Bilateria Bilateria No
Xbo-Mir-2001 None MIR-2001 UGUGACC None None 3C-assembly_contig_1901 5658518 5658576 - Bilateria Bilateria No
Xbo-Novel-2 None XBO-NOVEL-2 CACCUUG None None 3C-assembly_contig_1894 984457 984517 + X. bocki X. bocki No 1 1
Xbo-Mir-34 None MIR-34 GGCAGUG None None 3C-assembly_contig_1897 679753 679812 + X. bocki Bilateria Unknown 1 1
Xbo-Novel-3 None XBO-NOVEL-3 GAUGACA None None 3C-assembly_contig_1894 2015116 2015174 - X. bocki X. bocki No 1
Xbo-Mir-219 xbo-mir-219 MIR-219 GAACUGU MIMAT0020122 None 3C-assembly_contig_1887 1228806 1228866 + Bilateria Bilateria No
Xbo-Novel-4 None XBO-NOVEL-4 GCCGUCU None None 3C-assembly_contig_1899 3645412 3645474 + X. bocki X. bocki No 1 1
Xbo-Mir-124 xbo-mir-124 MIR-124 AAGGCAC None MIMAT0020120 3C-assembly_contig_1510 6690 6750 + Bilateria Bilateria Unknown
Xbo-Novel-5 None XBO-NOVEL-5 UUGGUUC None None 3C-assembly_contig_1899 5730645 5730703 - X. bocki X. bocki No 1 1
Xbo-Mir-133 None MIR-133 UUGGUCC None None Mir-133_trace 188 247 + Bilateria Bilateria Unknown 1 1
Xbo-Novel-6 None XBO-NOVEL-6 UUAGCUU None None 3C-assembly_contig_1899 5831313 5831372 - X. bocki X. bocki No 1 1
Xbo-Mir-190 None MIR-190 GAUAUGU None None 3C-assembly_contig_1876 142884 142942 + Bilateria Bilateria No 1 1
Xbo-Mir-278 None MIR-278 CGGUGGG None None 3C-assembly_contig_1803 3133 3191 - Bilateria Bilateria No 1
Xbo-Mir-7 None MIR-7 GGAAGAC None None 3C-assembly_contig_1897 2346174 2346234 - Bilateria Bilateria Unknown 1
Xbo-Novel-7 None XBO-NOVEL-7 GCGGUAG None None 3C-assembly_contig_1899 6309211 6309268 + X. bocki X. bocki No 1
Xbo-Mir-31 None MIR-31 GGCAAGA None None 3C-assembly_contig_1893 936263 936322 + Bilateria Bilateria No 1
Xbo-Mir-103 xbo-mir-2013 MIR-103 GCAGCAU None MIMAT0020119 3C-assembly_contig_1892 2634204 2634263 + Deuterostomia Deuterostomia No 1 1
Xbo-Mir-96-P1 None MIR-96 UUGGCAC None None scaffold1822 63524 63583 + Bilateria Bilateria Unknown
Xbo-Mir-193-P1 None MIR-193 AAGAUUU None None 3C-assembly_contig_1899 7006674 7006730 + Bilateria Bilateria No 1
Xbo-Mir-29-P1 None MIR-29 AGCACCA None None scaffold1822 81302 81360 - X. bocki Bilateria No 1 1
Xbo-Mir-22-o1d None MIR-22 CAGCUCC None None 3C-assembly_contig_1887 275115 275175 - X. bocki Bilateria No 1 1
Xbo-Mir-193-P2 None MIR-193 AAUGCCC None None 3C-assembly_contig_1899 7008745 7008803 + Bilateria Bilateria No 1
Xbo-Mir-10-P2 None MIR-10 ACCCGUA None None 3C-assembly_contig_1897 2779703 2779761 - X. bocki Eumetazoa Unknown
Xbo-Mir-29-P2 None MIR-29 AGCACCA None None scaffold1822 81450 81510 - X. bocki Bilateria No 1 1
Xbo-Mir-252-P2h None MIR-252 UAAGUAG None None 3C-assembly_contig_130 1784 1844 + X. bocki Bilateria Unknown
Xbo-Mir-10-P3 None MIR-10 CAGGGUU None None 3C-assembly_contig_1897 2807512 2807570 + Bilateria Eumetazoa No 1 1
Xbo-Mir-210-P17 None MIR-210 GUGGCUU None None 3C-assembly_contig_1891 2632638 2632700 + X. bocki Bilateria No 1 1
Xbo-Mir-210-P18 None MIR-210 UGUGCGU None None 3C-assembly_contig_1891 2632800 2632860 + X. bocki Bilateria No 1
Xbo-Mir-92-o86 None MIR-92 AUUGCAC None None 3C-assembly_contig_1891 1624184 1624243 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o87 None MIR-92 ACUGCAC None None 3C-assembly_contig_1891 1629698 1629759 + X. bocki Bilateria None 1
Xbo-Mir-92-o88 xbo-mir-92a MIR-92 AUUGCAC None MIMAT0020118 3C-assembly_contig_1891 1630055 1630115 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o89 xbo-mir-92b MIR-92 ACUGCAC None MIMAT0020125 3C-assembly_contig_1891 1630481 1630541 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o91 None MIR-92 AUUGCAC None None 3C-assembly_contig_1891 1631006 1631065 + X. bocki Bilateria None
Xbo-Mir-22-o1e None MIR-22 CAGCUCC None None 3C-assembly_contig_1901 7143273 7143332 - X. bocki Bilateria No 1 1
Xbo-Mir-252-P1i None MIR-252 UAAGUAG None None None None None None X. bocki Bilateria Unknown
Xbo-Mir-252-P1g None MIR-252 UAAGUAG None None 3C-assembly_contig_1901 5657340 5657395 - X. bocki Bilateria No 1 1
Xbo-Mir-252-P2g None MIR-252 UAAGUAC None None 3C-assembly_contig_1901 5656186 5656240 - X. bocki Bilateria No 1
Xbo-Mir-10-P2-as None MIR-10 CCCUUAG None None 3C-assembly_contig_1897 2779706 2779762 + X. bocki Eumetazoa Unknown

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