MirGeneDB 2.1

287 Tetraodon nigroviridis microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Sp Sp Sp To
Tni-Mir-210 tni-mir-210 MIR-210 GCCACUG None MIMAT0003096 13 6095031 6095092 + Bilateria Bilateria No 1
Tni-Mir-31 None MIR-31 GGCAAGA None None Un_random 12278863 12278922 - Bilateria Bilateria Unknown 1
Tni-Mir-217 tni-mir-217 MIR-217 ACUGCAU MIMAT0002972 None 17 5748319 5748377 + Chordata Chordata Unknown 1
Tni-Mir-144 tni-mir-144 MIR-144 ACAGUAU None MIMAT0003021 7 2925543 2925603 - Vertebrata Vertebrata No 1
Tni-Mir-122 tni-mir-122 MIR-122 GGAGUGU MIMAT0002992 None 4 6516674 6516731 + Vertebrata Vertebrata No 1
Tni-Mir-202 tni-mir-202 MIR-202 UCCUAUG None MIMAT0003074 Un_random 94550743 94550800 + Vertebrata Vertebrata Unknown
Tni-Mir-147 None MIR-147 UGUGCGG None None 5 10212485 10212547 + Vertebrata Vertebrata No
Tni-Mir-155 None MIR-155 UAAUGCU None None 5 8201365 8201424 - Vertebrata Vertebrata No 1
Tni-Mir-451 None MIR-451 AACCGUU None 7 2925418 2925460 - Vertebrata Vertebrata NA 1
Tni-Mir-459 None MIR-459 CAGUAAC None None 3 2976224 2976286 - Vertebrata Vertebrata Unknown
Tni-Mir-1788 None MIR-1788 GCUUGUU None None 2 17694044 17694101 - Vertebrata Vertebrata Yes 1
Tni-Mir-223 tni-mir-223 MIR-223 GUCAGUU None MIMAT0002895 Un_random 92603290 92603354 - Vertebrata Vertebrata No 1
Tni-Mir-338-P1 None MIR-338 CCAGCAU None None 2 6249043 6249104 - Vertebrata Vertebrata No 1
Tni-Mir-138-P2 tni-mir-138 MIR-138 GCUGGUG MIMAT0003080 None 13 1437205 1437272 + Vertebrata Vertebrata No 1
Tni-Mir-8-P1a tni-mir-200b MIR-8 AAUACUG None MIMAT0002984 Un_random 2991282 2991341 + Vertebrata Bilateria No 1
Tni-Mir-22-P1a tni-mir-22b MIR-22 AGCUGCC None MIMAT0003046 12 6138920 6138983 + Vertebrata Bilateria No 1 1
Tni-Mir-8-P2a tni-mir-200a MIR-8 AACACUG None MIMAT0002982 Un_random 2991451 2991512 + Vertebrata Bilateria No 1
Tni-Mir-216-P2a tni-mir-216b MIR-216 AAUCUCU MIMAT0002976 None 17 5747094 5747154 + Vertebrata Bilateria Unknown 1
Tni-Mir-8-P3a tni-mir-429 MIR-8 AAUACUG None MIMAT0002980 Un_random 2992668 2992726 + Vertebrata Bilateria No 1 1
Tni-Mir-216-P2b tni-mir-216a MIR-216 AAUCUCA MIMAT0002974 None 17 5747764 5747826 + Vertebrata Bilateria Unknown 1
Tni-Mir-101-P1-v1 tni-mir-101a MIR-101 ACAGUAC None MIMAT0002903 1 20355621 20355679 + Vertebrata Vertebrata No
Tni-Mir-101-P2-v1 tni-mir-101b MIR-101 ACAGUAC None MIMAT0003040 4 1028860 1028918 + Vertebrata Vertebrata No 1 1
Tni-Mir-101-P1-v2 tni-mir-101a MIR-101 UACAGUA None MIMAT0002903 1 20355622 20355678 + Vertebrata Vertebrata No
Tni-Mir-101-P2-v2 tni-mir-101b MIR-101 UACAGUA None MIMAT0003040 4 1028861 1028917 + Vertebrata Vertebrata No 1
Tni-Mir-425 None MIR-425 AUGACAC None None 9 665884 665947 + Gnathostomata Gnathostomata No 1
Tni-Mir-1306 None MIR-1306 CACCUCC None None 12 10862462 10862522 - Gnathostomata Gnathostomata Yes 1
Tni-Mir-139 None MIR-139 CUACAGU None None Un_random 82311596 82311657 - Gnathostomata Gnathostomata No
Tni-Mir-2188 None MIR-2188 AGGUCCA None None 12 6747621 6747680 - Gnathostomata Gnathostomata No 1 1
Tni-Mir-1388 None MIR-1388 UCUCAGG None None 9 5786618 5786676 + Gnathostomata Gnathostomata No 1
Tni-Mir-725 None MIR-725 UCAGUCA None None 1 16440623 16440684 + Gnathostomata Gnathostomata Unknown
Tni-Mir-150 None MIR-150 CUCCCAA None None Un_random 55607759 55607819 + Gnathostomata Gnathostomata No
Tni-Mir-191 None MIR-191 AACGGAA None None 9 665421 665482 + Gnathostomata Gnathostomata No 1
Tni-Mir-24-P1 None MIR-24 GGCUCAG None None 15_random 3093022 3093080 - Gnathostomata Vertebrata Yes
Tni-Mir-128-P1 tni-mir-128-2 MIR-128 CACAGUG None MIMAT0003019 21 1237210 1237268 - Gnathostomata Vertebrata No 1 1
Tni-Mir-1-P1 tni-mir-1 MIR-1 GGAAUGU None MIMAT0003072 15_random 1423496 1423557 - Gnathostomata Bilateria No
Tni-Mir-34-P1 None MIR-34 GGCAGUG None None 9 2828345 2828409 - Gnathostomata Bilateria Unknown 1 1
Tni-Mir-146-P1 None MIR-146 GAGAACU None None 17 4971502 4971563 + Gnathostomata Vertebrata No 1
Tni-Mir-27-P1 None MIR-27 UCACAGU None None 15_random 3094204 3094266 - Gnathostomata Vertebrata No 1
Tni-Mir-23-P1 tni-mir-23a-2 MIR-23 UCACAUU None MIMAT0002913 15_random 3094562 3094622 - Gnathostomata Vertebrata No
Tni-Mir-135-P1 tni-mir-135b MIR-135 AUGGCUU MIMAT0003031 None 9 635490 635549 + Gnathostomata Chordata No 1
Tni-Mir-17-P1d None MIR-17 AAAGUGC None None 1 5570107 5570169 - Gnathostomata Vertebrata No 1
Tni-Mir-30-P1d None MIR-30 UUUCAGU None None 21 1387761 1387825 + Gnathostomata Vertebrata No 1
Tni-Mir-218-P2 tni-mir-218a-2 MIR-218 UGUGCUU MIMAT0002994 None 18 234311 234377 + Gnathostomata Vertebrata Unknown
Tni-Mir-148-P2 tni-mir-148 MIR-148 CAGUGCA None MIMAT0002962 2 13327074 13327133 - Gnathostomata Vertebrata No
Tni-Mir-204-P2 tni-mir-204b MIR-204 UCCCUUU MIMAT0002935 None 12 981062 981119 + Gnathostomata Vertebrata Unknown 1 1
Tni-Mir-19-P2d None MIR-19 GUGCAAA None None 1 5569689 5569755 - Gnathostomata Vertebrata No 1
Tni-Mir-92-P2d tni-mir-25 MIR-92 AUUGCAC None MIMAT0002915 1 5569539 5569598 - Gnathostomata Bilateria No 1 1
Tni-Mir-30-P2d None MIR-30 GUAAACA None None 21 1387972 1388031 + Gnathostomata Vertebrata No 1 1
Tni-Mir-24-P3 tni-mir-24-2 MIR-24 GGCUCAG None MIMAT0003066 3 8971072 8971130 + Gnathostomata Vertebrata Yes 1 1
Tni-Mir-1-P3 None MIR-1 GGAAUGU None None Un_random 96815883 96815943 + Gnathostomata Bilateria No
Tni-Mir-33-P3 None MIR-33 UGCAUUG None None Un_random 5787244 5787303 + Gnathostomata Bilateria Yes 1
Tni-Mir-218-P3 tni-mir-218b MIR-218 UGUGCUU MIMAT0002986 None 4 1554674 1554731 + Gnathostomata Vertebrata Unknown 1 1
Tni-Mir-27-P3 tni-mir-27c MIR-27 UCACAGU None MIMAT0003078 3 8970188 8970245 + Gnathostomata Vertebrata No 1 1
Tni-Mir-148-P3 tni-mir-152 MIR-148 CAGUGCA None MIMAT0003104 Un_random 5385294 5385354 - Gnathostomata Vertebrata No 1 1
Tni-Mir-190-P3 None MIR-190 GAUAUGU None None 8 7791021 7791086 - Gnathostomata Bilateria Unknown 1
Tni-Mir-7-P3 tni-mir-7 MIR-7 GGAAGAC MIMAT0003010 None 8 1820450 1820510 + Gnathostomata Bilateria Unknown 1
Tni-Mir-23-P3 tni-mir-23a-3 MIR-23 UCACAUU None MIMAT0002913 3 8969974 8970035 + Gnathostomata Vertebrata No
Tni-Mir-26-P4 tni-mir-26 MIR-26 UCAAGUA MIMAT0003038 None None None None None Gnathostomata Vertebrata No
Tni-Mir-218-P4 tni-mir-218a-1 MIR-218 UGUGCUU MIMAT0002994 None 1 5655180 5655244 - Gnathostomata Vertebrata Unknown 1
Tni-Mir-17-P4d None MIR-17 AAAGUGC None None 1 5569901 5569959 - Gnathostomata Vertebrata No
Tni-Mir-30-P1a tni-mir-30d MIR-30 GUAAACA MIMAT0002950 None 21 5298839 5298898 + Gnathostomata Vertebrata No 1 1
Tni-Mir-30-P2a tni-mir-30b MIR-30 GUAAACA MIMAT0002948 None 21 5299014 5299077 + Gnathostomata Vertebrata Yes 1
Tni-Mir-30-P1b None MIR-30 UUUCAGU None None 17 8583486 8583548 + Gnathostomata Vertebrata No 1
Tni-Mir-15-P1b tni-mir-15b MIR-15 AGCAGCG MIMAT0003086 None 16 2089823 2089885 - Gnathostomata Olfactores No
Tni-Mir-30-P2b tni-mir-30c MIR-30 GUAAACA MIMAT0003023 None 17 8584380 8584441 + Gnathostomata Vertebrata No 1 1
Tni-Mir-15-P2b None MIR-15 AGCAGCA None None 16 2089596 2089660 - Gnathostomata Olfactores Unknown 1
Tni-Mir-34-P3c None MIR-34 GGCAGUG None None 12 5648628 5648686 + Gnathostomata Bilateria Unknown 1
Tni-Let-7-P2c3 tni-let-7j LET-7 GAGGUAG MIMAT0003014 None 11 5230982 5231059 + Gnathostomata Bilateria Yes 1
Tni-Mir-140-P1-v1 tni-mir-140 MIR-140 CCACAGG MIMAT0003025 None 13 1172500 1172561 + Gnathostomata Vertebrata No 1 1
Tni-Mir-133-P1-v1 tni-mir-133 MIR-133 UUGGUCC None MIMAT0003058 15_random 1420865 1420924 - Gnathostomata Bilateria No 1
Tni-Mir-142-P1-v1 tni-mir-142a MIR-142 AUAAAGU MIMAT0002909 None 7 2557223 2557282 + Gnathostomata Vertebrata No 1
Tni-Mir-142-P2-v1 tni-mir-142b MIR-142 AUAAAGU MIMAT0002946 None 16 3999100 3999159 + Gnathostomata Vertebrata No 1
Tni-Mir-199-P3-v1 tni-mir-199-3 MIR-199 CAGUAGU MIMAT0002960 None 3 11403070 11403130 - Gnathostomata Vertebrata No 1
Tni-Mir-124-P4-v1 tni-mir-124-3 MIR-124 AAGGCAC None MIMAT0002897 10 7519420 7519479 + Gnathostomata Bilateria No 1
Tni-Mir-140-P1-v2 tni-mir-140 MIR-140 ACCACAG MIMAT0003025 None 13 1172500 1172561 + Gnathostomata Vertebrata No 1
Tni-Mir-133-P1-v2 tni-mir-133 MIR-133 UGGUCCC None MIMAT0003058 15_random 1420865 1420924 - Gnathostomata Bilateria No 1
Tni-Mir-142-P1-v2 tni-mir-142a MIR-142 AUAAAGU MIMAT0002909 None 7 2557223 2557282 + Gnathostomata Vertebrata No 1
Tni-Mir-142-P2-v2 tni-mir-142b MIR-142 AUAAAGU MIMAT0002946 None 16 3999100 3999159 + Gnathostomata Vertebrata No 1
Tni-Mir-199-P3-v2 tni-mir-199-3 MIR-199 ACAGUAG MIMAT0002960 None 3 11403070 11403130 - Gnathostomata Vertebrata No 1
Tni-Mir-124-P4-v2 tni-mir-124-3 MIR-124 UAAGGCA None MIMAT0002897 10 7519420 7519478 + Gnathostomata Bilateria No 1
Tni-Mir-142-P1-v3 tni-mir-142a MIR-142 GUAGUGU MIMAT0002909 None 7 2557223 2557282 + Gnathostomata Vertebrata No 1
Tni-Mir-142-P2-v3 tni-mir-142b MIR-142 GUAGUGU MIMAT0002946 None 16 3999100 3999159 + Gnathostomata Vertebrata No 1
Tni-Mir-199-P3-v3 tni-mir-199-3 MIR-199 AGUAGUC MIMAT0002960 None 3 11403070 11403130 - Gnathostomata Vertebrata No 1
Tni-Mir-142-P1-v4 tni-mir-142a MIR-142 CCAUAAA MIMAT0002909 None 7 2557221 2557284 + Gnathostomata Vertebrata No
Tni-Mir-142-P2-v4 tni-mir-142b MIR-142 CCAUAAA MIMAT0002946 None 16 3999098 3999161 + Gnathostomata Vertebrata No
Tni-Mir-737 None MIR-737 UUUUUUU None None Un_random 92321647 92321707 - Osteichthyes Osteichthyes Unknown 1 1
Tni-Mir-458 tni-mir-458 MIR-458 UAGCUCU None MIMAT0002937 1_random 761745 761801 - Osteichthyes Osteichthyes No 1
Tni-Mir-187 tni-mir-187 MIR-187 CGUGUCU None MIMAT0002931 21 1019291 1019352 - Osteichthyes Osteichthyes Yes 1
Tni-Mir-7147 None MIR-7147 GUACCAU None None 6 5697463 5697520 - Osteichthyes Osteichthyes Unknown 1
Tni-Mir-726 None MIR-726 UCACUAC None None 11 10121083 10121143 - Osteichthyes Osteichthyes Unknown 1
Tni-Mir-460-P1 tni-mir-460 MIR-460 ACAGCGC None MIMAT0002998 15_random 1243748 1243806 - Osteichthyes Osteichthyes Yes 1
Tni-Mir-489-v1 tni-mir-489 MIR-489 UGACAUC None MIMAT0002939 21_random 1370454 1370512 + Osteichthyes Osteichthyes No 1
Tni-Mir-489-v2 tni-mir-489 MIR-489 GACAUCA None MIMAT0002939 21_random 1370453 1370513 + Osteichthyes Osteichthyes No 1 1
Tni-Mir-7133 None MIR-7133 AGUUUGA None None Un_random 54516665 54516723 + Clupeocephala Clupeocephala No 1
Tni-Mir-2184-P1 None MIR-2184 ACAGUAA None None 7 7923438 7923495 + Clupeocephala Gnathostomata No
Tni-Mir-184-P1 None MIR-184 GGACGGA None None 13 2752851 2752914 + Clupeocephala Bilateria No 1
Tni-Mir-728-P1 None MIR-728 AUACUAA None None 6 6651213 6651275 + Clupeocephala Neopterygii No 1 1
Tni-Mir-499-P1 None MIR-499 UAAGACU None None 11 10019981 10020040 - Clupeocephala Vertebrata Unknown 1 1
Tni-Mir-723-P1 None MIR-723 GACAUCA None None 3 14958877 14958937 - Clupeocephala Clupeocephala No
Tni-Mir-7132-P1 None MIR-7132 ACUUGGU None None Un_random 7127190 7127247 + Clupeocephala Clupeocephala No 1 1 1
Tni-Mir-21-P1 tni-mir-21 MIR-21 AGCUUAU MIMAT0003000 None 7 1044929 1044989 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-455-P1 tni-mir-455 MIR-455 AUGUGCC MIMAT0003029 None 12 4822221 4822279 - Clupeocephala Vertebrata No
Tni-Mir-184-P2 tni-mir-184 MIR-184 GGACGGA None MIMAT0002927 5 2363268 2363330 - Clupeocephala Bilateria No 1
Tni-Mir-728-P2 None MIR-728 AUACUAA None None 15 2762818 2762877 - Clupeocephala Neopterygii Unknown 1
Tni-Mir-723-P2 None MIR-723 GACAUCA None None 2 3615741 3615798 + Clupeocephala Clupeocephala Unknown
Tni-Mir-21-P2 None MIR-21 AGCUUAU None None Un_random 58489024 58489084 + Clupeocephala Vertebrata No 1 1
Tni-Mir-375-P2 tni-mir-375 MIR-375 UUGUUCG None MIMAT0003070 2 17702703 17702760 - Clupeocephala Bilateria No 1
Tni-Mir-455-P2 None MIR-455 AUGUGCC None None Un_random 101732509 101732567 + Clupeocephala Vertebrata No
Tni-Mir-29-P1d1 None MIR-29 AGCACCA None None 11 8724044 8724104 + Clupeocephala Bilateria No
Tni-Let-7-P1d1 None LET-7 GAGGUAG None None 16 8250022 8250088 - Clupeocephala Bilateria No
Tni-Mir-10-P2d1 None MIR-10 ACCCGUA None None 16 8251149 8251210 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-29-P2d1 None MIR-29 AGCACCA None None 11 8724289 8724347 + Clupeocephala Bilateria No 1
Tni-Mir-10-P3d1 None MIR-10 CCCUGAG None None 16 8246142 8246203 - Clupeocephala Eumetazoa Unknown 1 1
Tni-Mir-29-P1d2 tni-mir-29b-2 MIR-29 AGCACCA None MIMAT0003056 9 9583207 9583267 + Clupeocephala Bilateria No 1
Tni-Let-7-P1d2 tni-let-7a-1 LET-7 GAGGUAG MIMAT0002929 None 7 5619183 5619249 - Clupeocephala Bilateria No
Tni-Mir-10-P2d2 tni-mir-100 MIR-10 ACCCGUA MIMAT0003064 None 7 5619637 5619693 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-29-P2d2 tni-mir-29a-1 MIR-29 AGCACCA None MIMAT0003054 9 9583409 9583468 + Clupeocephala Bilateria No 1
Tni-Mir-10-P3d2 tni-mir-125b MIR-10 CCCUGAG MIMAT0003062 None 7 5613643 5613704 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-96-P1a tni-mir-96 MIR-96 UUGGCAC MIMAT0003092 None 19 3385392 3385455 - Clupeocephala Bilateria Unknown 1
Tni-Mir-9-P1a tni-mir-9-3 MIR-9 CUUUGGU MIMAT0002911 None 13 5474110 5474171 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-33-P1a None MIR-33 UGCAUUG None None 3 9418172 9418232 - Clupeocephala Bilateria Yes 1 1
Tni-Mir-129-P1a tni-mir-129-1 MIR-129 AGCCCUU MIMAT0003036 None 13 12882721 12882781 + Clupeocephala Chordata No 1 1 1
Tni-Mir-26-P1a None MIR-26 UCAAGUA None None 6 4014119 4014177 + Clupeocephala Vertebrata No 1
Tni-Mir-138-P1a None MIR-138 GCUGGUG None None 21 4348474 4348534 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-132-P1a tni-mir-132 MIR-132 AACAGUC None MIMAT0003060 Un_random 63608572 63608634 + Clupeocephala Vertebrata No 1
Tni-Mir-196-P1a tni-mir-196a-2 MIR-196 AGGUAGU MIMAT0002956 None 21 3025758 3025815 + Clupeocephala Olfactores Unknown 1
Tni-Mir-190-P1a None MIR-190 GAUAUGU None None 5 2569527 2569586 - Clupeocephala Bilateria No 1 1
Tni-Mir-103-P1a tni-mir-107 MIR-103 GCAGCAU None MIMAT0003044 17 10614424 10614483 + Clupeocephala Deuterostomia No 1
Tni-Mir-96-P2a tni-mir-182 MIR-96 UUGGCAA None MIMAT0003094 19 3385158 3385222 - Clupeocephala Bilateria No
Tni-Mir-128-P2a tni-mir-128-1 MIR-128 CACAGUG None MIMAT0003019 3 4160313 4160370 - Clupeocephala Vertebrata No 1
Tni-Mir-1-P2a None MIR-1 GGAAUGU None None 14 5699806 5699865 + Clupeocephala Bilateria No 1
Tni-Mir-129-P2a None MIR-129 AGCCCUU None None 13 4272364 4272424 + Clupeocephala Chordata No 1 1 1
Tni-Mir-153-P2a tni-mir-153b MIR-153 UGCAUAG None MIMAT0003002 2 15371791 15371849 + Clupeocephala Bilateria No
Tni-Mir-194-P2a None MIR-194 GUAACAG None None 1 8091282 8091346 - Clupeocephala Vertebrata No 1 1
Tni-Mir-338-P2a tni-mir-338 MIR-338 CCAGCAU None MIMAT0003008 3 10941080 10941140 + Clupeocephala Vertebrata No 1
Tni-Mir-219-P2a None MIR-219 GAUUGUC None None 4 1194347 1194413 + Clupeocephala Bilateria Unknown 1
Tni-Mir-132-P2a tni-mir-212 MIR-132 CCUUGGC None MIMAT0003048 Un_random 63608305 63608373 + Clupeocephala Vertebrata No 1
Tni-Mir-103-P2a None MIR-103 GCAGCAU None None 10 12326434 12326493 - Clupeocephala Deuterostomia No
Tni-Mir-135-P2a None MIR-135 AUGGCUU None None 13 5265577 5265638 + Clupeocephala Chordata Unknown 1
Tni-Mir-96-P3a tni-mir-183 MIR-96 AUGGCAC MIMAT0003090 None 19 3385640 3385701 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P3a None MIR-9 CUUUGGU None None Un_random 34480108 34480169 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-219-P3a tni-mir-219-2 MIR-219 GAUUGUC MIMAT0002901 None Un_random 16276637 16276702 + Clupeocephala Bilateria Unknown 1
Tni-Mir-196-P3a tni-mir-196b MIR-196 AGGUAGU MIMAT0003034 None Un_random 5576389 5576449 - Clupeocephala Olfactores No 1
Tni-Mir-24-P4a None MIR-24 GGCUCAG None None 1 16060478 16060537 + Clupeocephala Vertebrata Yes 1 1
Tni-Mir-9-P4a tni-mir-9-4 MIR-9 CUUUGGU MIMAT0002911 None Un_random 92040539 92040598 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-27-P4a tni-mir-27e MIR-27 UCACAGU None MIMAT0003068 1 16059190 16059253 + Clupeocephala Vertebrata No
Tni-Mir-205-P4a tni-mir-205 MIR-205 CCUUCAU MIMAT0002966 None 9 9353934 9353993 - Clupeocephala Vertebrata No 1
Tni-Mir-23-P4a tni-mir-23a-1 MIR-23 UCACAUU None MIMAT0002913 1 16058804 16058867 + Clupeocephala Vertebrata No
Tni-Mir-135-P4a tni-mir-135a MIR-135 AUGGCUU MIMAT0003052 None 11 11400949 11401009 - Clupeocephala Chordata Unknown 1
Tni-Mir-17-P1a1 tni-mir-17-1 MIR-17 AAAGUGC MIMAT0002917 None 5 8188866 8188926 - Clupeocephala Vertebrata No
Tni-Mir-19-P1a1 tni-mir-19a MIR-19 GUGCAAA None MIMAT0002921 5 8188599 8188656 - Clupeocephala Vertebrata No 1 1
Tni-Mir-92-P1a1 tni-mir-92-2 MIR-92 AUUGCAC None MIMAT0002925 5 8188110 8188167 - Clupeocephala Bilateria No 1
Tni-Mir-181-P1a1 tni-mir-181a-1 MIR-181 ACAUUCA MIMAT0003050 MIMAT0003006 1 18565261 18565323 - Clupeocephala Vertebrata No
Tni-Mir-221-P1a1 tni-mir-222 MIR-221 GCUACAU None MIMAT0002905 CAAE01017358.1_SCAF17358 560 621 - Clupeocephala Vertebrata No 1 1 1
Tni-Mir-17-P2a1 tni-mir-18 MIR-17 AAGGUGC MIMAT0002919 None 5 8188734 8188798 - Clupeocephala Vertebrata No
Tni-Mir-19-P2a1 tni-mir-19b MIR-19 GUGCAAA None MIMAT0002923 5 8188261 8188319 - Clupeocephala Vertebrata No
Tni-Mir-181-P2a1 tni-mir-181b-1 MIR-181 ACAUUCA MIMAT0003004 None 1 18565056 18565116 - Clupeocephala Vertebrata Yes 1
Tni-Mir-221-P2a1 tni-mir-221 MIR-221 GCUACAU None MIMAT0002907 CAAE01017358.1_SCAF17358 254 317 - Clupeocephala Vertebrata No 1 1
Tni-Mir-17-P4a1 None MIR-17 AAAGUGC None None 5 8188398 8188455 - Clupeocephala Vertebrata No 1 1
Tni-Mir-17-P1a2 tni-mir-17-2 MIR-17 AAAGUGC MIMAT0002917 None 2 12891981 12892039 + Clupeocephala Vertebrata No
Tni-Mir-130-P1a2 tni-mir-130 MIR-130 AGUGCAA None MIMAT0002990 4 1515785 1515843 + Clupeocephala Vertebrata No 1
Tni-Mir-19-P1a2 None MIR-19 GUGCAAA None None 2 12892361 12892418 + Clupeocephala Vertebrata No 1
Tni-Mir-92-P1a2 tni-mir-92-1 MIR-92 AUUGCAC None MIMAT0002925 2 12892725 12892783 + Clupeocephala Bilateria No 1
Tni-Mir-15-P1a2 tni-mir-15a MIR-15 AGCAGCA MIMAT0003106 None 2 11019294 11019352 + Clupeocephala Olfactores No 1
Tni-Mir-17-P2a2 None MIR-17 AAGGUGC None None 2 12892243 12892307 + Clupeocephala Vertebrata No
Tni-Mir-130-P2a2 tni-mir-301 MIR-130 AGUGCAA None MIMAT0002988 4 1516061 1516123 + Clupeocephala Vertebrata No 1
Tni-Mir-19-P2a2 None MIR-19 GUGCAAA None None 2 12892619 12892679 + Clupeocephala Vertebrata No
Tni-Mir-15-P2a2 tni-mir-16 MIR-15 AGCAGCA MIMAT0003108 None 2 11019481 11019546 + Clupeocephala Olfactores No
Tni-Mir-17-P4a2 tni-mir-20 MIR-17 AAAGUGC MIMAT0003084 None 2 12892494 12892553 + Clupeocephala Vertebrata No 1
Tni-Mir-96-P1b None MIR-96 UUGGCAC None None 13 5039982 5040043 - Clupeocephala Bilateria Unknown 1
Tni-Mir-9-P1b None MIR-9 CUUUGGU None None 5 5099964 5100025 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-33-P1b None MIR-33 UGCAUUG None None 2 6025426 6025486 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-129-P1b None MIR-129 AGCCCUU None None 5 11469568 11469630 + Clupeocephala Chordata No 1 1 1
Tni-Mir-153-P1b tni-mir-153a MIR-153 UGCAUAG None MIMAT0003012 15 948753 948813 + Clupeocephala Bilateria No 1
Tni-Mir-26-P1b None MIR-26 UCAAGUA None None 15 2348349 2348409 + Clupeocephala Vertebrata No 1
Tni-Mir-132-P1b None MIR-132 AACAGUC None None 7 7924414 7924476 - Clupeocephala Vertebrata No
Tni-Mir-196-P1b None MIR-196 AGGUAGU None None 8 6797449 6797506 + Clupeocephala Olfactores No 1
Tni-Mir-204-P1b tni-mir-204a MIR-204 UCCCUUU MIMAT0003102 None 13 7729309 7729365 + Clupeocephala Vertebrata No 1 1
Tni-Mir-190-P1b tni-mir-190 MIR-190 GAUAUGU MIMAT0003110 None 13 7312010 7312068 - Clupeocephala Bilateria No 1 1
Tni-Mir-24-P2b tni-mir-24-1 MIR-24 GGCUCAG None MIMAT0003066 12 8518120 8518178 + Clupeocephala Vertebrata Yes
Tni-Mir-96-P2b None MIR-96 UUGGCAA None None 13 5039756 5039820 - Clupeocephala Bilateria Unknown 1
Tni-Mir-9-P2b tni-mir-9-2 MIR-9 CUUUGGU MIMAT0002911 None 12 2246027 2246086 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-129-P2b tni-mir-129-2 MIR-129 UUUUUGC MIMAT0003036 None 19 2390426 2390490 - Clupeocephala Chordata Unknown 1 1 1
Tni-Mir-153-P2b None MIR-153 UGCAUAG None None 3 991154 991212 + Clupeocephala Bilateria No 1
Tni-Mir-26-P2b None MIR-26 UCAAGUA None None 3 1744449 1744509 - Clupeocephala Vertebrata No 1 1
Tni-Mir-194-P2b tni-mir-194 MIR-194 GUAACAG MIMAT0002944 None 7 7655331 7655389 + Clupeocephala Vertebrata No 1 1
Tni-Mir-338-P2b None MIR-338 CCAGCAU None None 2 2385304 2385364 + Clupeocephala Vertebrata No 1 1
Tni-Mir-27-P2b tni-mir-27b MIR-27 UCACAGU None MIMAT0002952 12 8516519 8516581 + Clupeocephala Vertebrata No 1
Tni-Mir-219-P2b tni-mir-219-1 MIR-219 GAUUGUC MIMAT0002901 None 12 10155057 10155122 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-132-P2b None MIR-132 CCUUGGC None None 7 7924699 7924767 - Clupeocephala Vertebrata No 1
Tni-Mir-23-P2b tni-mir-23b MIR-23 UCACAUU None MIMAT0002954 12 8516226 8516284 + Clupeocephala Vertebrata No 1 1
Tni-Mir-103-P2b tni-mir-103 MIR-103 GCAGCAU None MIMAT0003042 1 5372738 5372798 - Clupeocephala Deuterostomia No 1 1
Tni-Mir-135-P2b None MIR-135 AUGGCUU None None 19 3913178 3913236 - Clupeocephala Chordata No 1
Tni-Mir-96-P3b None MIR-96 AUGGCAC None None 13 5040154 5040215 - Clupeocephala Bilateria Unknown 1
Tni-Mir-9-P3b tni-mir-9-1 MIR-9 CUUUGGU MIMAT0002911 None 21_random 1842694 1842755 + Clupeocephala Bilateria Unknown 1
Tni-Mir-137-P3b tni-mir-137 MIR-137 UAUUGCU None MIMAT0002933 18 4783334 4783392 - Clupeocephala Bilateria Unknown 1
Tni-Mir-219-P3b None MIR-219 GAUUGUC None None 8 6475886 6475950 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-24-P4b None MIR-24 GGCUCAG None None 15_random 2810523 2810582 + Clupeocephala Vertebrata No 1
Tni-Mir-9-P4b None MIR-9 CUUUGGU None None Un_random 105862125 105862181 - Clupeocephala Bilateria No 1
Tni-Mir-27-P4b None MIR-27 UCACAGU None None 15_random 2810064 2810128 + Clupeocephala Vertebrata No
Tni-Mir-135-P4b None MIR-135 AUGGCUU None None 9 8239055 8239116 - Clupeocephala Chordata Unknown 1
Tni-Mir-29-P1b1 tni-mir-29b-1 MIR-29 AGCACCA None MIMAT0003056 Un_random 8673333 8673394 + Clupeocephala Bilateria No 1 1
Tni-Mir-181-P1b1 None MIR-181 ACAUUCA None None Un_random 59809509 59809568 - Clupeocephala Vertebrata Unknown
Tni-Mir-22-P1b1 tni-mir-22a MIR-22 AGCUGCC None MIMAT0003100 10 10460516 10460578 + Clupeocephala Bilateria No 1 1
Tni-Let-7-P1b1 tni-let-7d LET-7 GAGGUAG MIMAT0002996 None 8 6075965 6076034 - Clupeocephala Bilateria Unknown 1
Tni-Mir-29-P2b1 tni-mir-29a-2 MIR-29 AGCACCA None MIMAT0003054 Un_random 8673485 8673545 + Clupeocephala Bilateria No
Tni-Mir-181-P2b1 tni-mir-181b-2 MIR-181 ACAUUCA MIMAT0003004 None Un_random 59809215 59809273 - Clupeocephala Vertebrata Unknown
Tni-Mir-193-P1b2 tni-mir-193 MIR-193 ACUGGCC None MIMAT0002970 Un_random 38919584 38919642 + Clupeocephala Bilateria No 1 1
Tni-Mir-10-P1b2 tni-mir-10d MIR-10 ACCCUGU MIMAT0003772 None 17 9715801 9715864 + Clupeocephala Eumetazoa Unknown 1
Tni-Mir-29-P1b2 None MIR-29 UGAUUUC None None 13 10251338 10251399 + Clupeocephala Bilateria No 1 1
Tni-Mir-22-P1b2 None MIR-22 AGCUGCC None None 7 8307611 8307673 - Clupeocephala Bilateria No 1
Tni-Let-7-P1b2 None LET-7 GAGGUAG None None 21_random 1794498 1794567 + Clupeocephala Bilateria Unknown 1
Tni-Mir-193-P2b2 tni-mir-365 MIR-193 AAUGCCC None MIMAT0002968 Un_random 38921292 38921353 + Clupeocephala Bilateria No 1
Tni-Mir-10-P3b2 tni-mir-125a MIR-10 CCCUGAG MIMAT0003082 None 21_random 1797975 1798033 + Clupeocephala Eumetazoa No 1
Tni-Mir-181-P1c1 None MIR-181 ACAUUCA None None 15 5125424 5125490 + Clupeocephala Vertebrata No 1
Tni-Mir-181-P1c2 tni-mir-181a-2 MIR-181 ACAUUCA MIMAT0003050 None Un_random 58989026 58989088 - Clupeocephala Vertebrata No 1
Tni-Mir-181-P2c2 None MIR-181 ACAUUCA None None Un_random 58987909 58987968 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-722-P1-v1 None MIR-722 UUUGCAG None None 3 11284670 11284734 - Clupeocephala Osteichthyes No 1 1
Tni-Mir-724-P1-v1 None MIR-724 UAAAGGG None None 9 3122558 3122618 - Clupeocephala Neopterygii Unknown
Tni-Mir-214-P1-v1 tni-mir-214 MIR-214 GCCUGUC None MIMAT0003027 1 12449356 12449416 + Clupeocephala Gnathostomata No 1
Tni-Mir-727-P1-v1 None MIR-727 UGAGGCG None None 6 6650136 6650202 + Clupeocephala Osteichthyes No
Tni-Mir-722-P2-v1 None MIR-722 UUUGCAG None None Un_random 14853546 14853610 + Clupeocephala Osteichthyes No 1 1
Tni-Mir-203-P2-v1 tni-mir-203 MIR-203 UGAAAUG None MIMAT0003076 Un_random 105176090 105176149 + Clupeocephala Vertebrata No
Tni-Mir-724-P2-v1 None MIR-724 UAAAGGG None None 11 9264426 9264486 + Clupeocephala Neopterygii Unknown
Tni-Mir-214-P2-v1 tni-mir-214 MIR-214 CAGCAGG None MIMAT0003027 15 2935595 2935657 + Clupeocephala Gnathostomata No
Tni-Mir-727-P2-v1 None MIR-727 UGAGGCG None None 15 2764145 2764210 - Clupeocephala Osteichthyes No
Tni-Mir-10-P1d1-v1 tni-mir-10b-1 MIR-10 ACCCUGU MIMAT0002964 None 9 4255306 4255366 + Clupeocephala Eumetazoa Unknown 1 1
Tni-Mir-124-P2a-v1 tni-mir-124-2 MIR-124 AAGGCAC None MIMAT0002897 14 9544670 9544730 - Clupeocephala Bilateria No 1
Tni-Mir-133-P2a-v1 None MIR-133 UUGGUCC None None 14 5700455 5700514 + Clupeocephala Bilateria Unknown 1
Tni-Mir-199-P2a-v1 tni-mir-199-2 MIR-199 CAGUAGU MIMAT0002960 None 4 2900527 2900587 - Clupeocephala Vertebrata No
Tni-Mir-124-P1b-v1 tni-mir-124-1 MIR-124 AAGGCAC None MIMAT0002897 6 3469441 3469499 - Clupeocephala Bilateria No 1
Tni-Mir-199-P1b-v1 tni-mir-199-1 MIR-199 CAGUAGU MIMAT0002960 None 15 2934183 2934243 + Clupeocephala Vertebrata No 1
Tni-Mir-192-P2b-v1 tni-mir-192 MIR-192 UGACCUA MIMAT0002942 None 7 7655511 7655571 + Clupeocephala Vertebrata No 1
Tni-Mir-124-P2b-v1 tni-mir-124-2 MIR-124 AAGGCAC None MIMAT0002897 14 9544670 9544730 - Clupeocephala Bilateria No 1
Tni-Mir-126-P2b-v1 tni-mir-126 MIR-126 CGUACCG None MIMAT0002958 4 5708444 5708502 - Clupeocephala Olfactores No 1
Tni-Mir-10-P1b1-v1 tni-mir-10b-2 MIR-10 ACCCUGU MIMAT0002964 None 2 13424290 13424351 - Clupeocephala Eumetazoa Unknown 1 1
Tni-Mir-10-P1c1-v1 tni-mir-10c MIR-10 ACCCUGU MIMAT0003088 None Un_random 5507315 5507380 - Clupeocephala Eumetazoa No 1
Tni-Mir-181-P2c1-v1 None MIR-181 ACAUUCA None None 15 5125603 5125664 + Clupeocephala Vertebrata Unknown 1
Tni-Mir-10-P1c2-v1 None MIR-10 ACCCUGU None None 2 1745676 1745738 - Clupeocephala Eumetazoa No 1
Tni-Mir-722-P1-v2 None MIR-722 UUGCAGA None None 3 11284670 11284734 - Clupeocephala Osteichthyes Yes 1
Tni-Mir-724-P1-v2 None MIR-724 AAAGGGA None None 9 3122559 3122617 - Clupeocephala Neopterygii Unknown
Tni-Mir-214-P1-v2 tni-mir-214 MIR-214 CCUGUCU None MIMAT0003027 1 12449357 12449415 + Clupeocephala Gnathostomata No
Tni-Mir-727-P1-v2 None MIR-727 UUGAGGC None None 6 6650138 6650200 + Clupeocephala Osteichthyes No 1
Tni-Mir-722-P2-v2 None MIR-722 UUGCAGA None None Un_random 14853546 14853610 + Clupeocephala Osteichthyes Yes 1
Tni-Mir-203-P2-v2 tni-mir-203 MIR-203 GAAAUGU None MIMAT0003076 Un_random 105176089 105176150 + Clupeocephala Vertebrata No
Tni-Mir-724-P2-v2 None MIR-724 AAAGGGA None None 11 9264427 9264485 + Clupeocephala Neopterygii Unknown
Tni-Mir-214-P2-v2 tni-mir-214 MIR-214 ACAGCAG None MIMAT0003027 15 2935596 2935656 + Clupeocephala Gnathostomata No
Tni-Mir-727-P2-v2 None MIR-727 UUGAGGC None None 15 2764146 2764208 - Clupeocephala Osteichthyes No 1
Tni-Mir-10-P1d1-v2 tni-mir-10b-1 MIR-10 CCCUGUA MIMAT0002964 None 9 4255307 4255365 + Clupeocephala Eumetazoa Unknown
Tni-Mir-124-P2a-v2 tni-mir-124-2 MIR-124 UAAGGCA None MIMAT0002897 14 9544671 9544730 - Clupeocephala Bilateria No 1
Tni-Mir-133-P2a-v2 None MIR-133 UGGUCCC None None 14 5700455 5700514 + Clupeocephala Bilateria Unknown 1
Tni-Mir-199-P2a-v2 tni-mir-199-2 MIR-199 ACAGUAG MIMAT0002960 None 4 2900527 2900587 - Clupeocephala Vertebrata No
Tni-Mir-124-P1b-v2 tni-mir-124-1 MIR-124 UAAGGCA None MIMAT0002897 6 3469442 3469499 - Clupeocephala Bilateria No 1
Tni-Mir-199-P1b-v2 tni-mir-199-1 MIR-199 ACAGUAG MIMAT0002960 None 15 2934183 2934243 + Clupeocephala Vertebrata No 1
Tni-Mir-192-P2b-v2 tni-mir-192 MIR-192 GACCUAU MIMAT0002942 None 7 7655512 7655570 + Clupeocephala Vertebrata Unknown 1
Tni-Mir-124-P2b-v2 tni-mir-124-2 MIR-124 UAAGGCA None MIMAT0002897 14 9544671 9544730 - Clupeocephala Bilateria No 1
Tni-Mir-126-P2b-v2 tni-mir-126 MIR-126 AUUAUUA None MIMAT0002958 4 5708444 5708502 - Clupeocephala Olfactores No 1
Tni-Mir-10-P1b1-v2 tni-mir-10b-2 MIR-10 CCCUGUA MIMAT0002964 None 2 13424291 13424350 - Clupeocephala Eumetazoa Unknown
Tni-Mir-10-P1c1-v2 tni-mir-10c MIR-10 CCCUGUA MIMAT0003088 None Un_random 5507316 5507379 - Clupeocephala Eumetazoa No 1
Tni-Mir-181-P2c1-v2 None MIR-181 CAUUCAU None None 15 5125604 5125663 + Clupeocephala Vertebrata No
Tni-Mir-10-P1c2-v2 None MIR-10 CCCUGUA None None 2 1745677 1745737 - Clupeocephala Eumetazoa Unknown 1 1
Tni-Mir-199-P2a-v3 tni-mir-199-2 MIR-199 AGUAGUC MIMAT0002960 None 4 2900527 2900587 - Clupeocephala Vertebrata No
Tni-Mir-199-P1b-v3 tni-mir-199-1 MIR-199 AGUAGUC MIMAT0002960 None 15 2934183 2934243 + Clupeocephala Vertebrata No 1
Tni-Mir-126-P2b-v3 tni-mir-126 MIR-126 UCGUACC None MIMAT0002958 4 5708444 5708502 - Clupeocephala Olfactores No 1
Tni-Let-7-P2a2a None LET-7 GAGGUAG None None 19 5327786 5327856 - Clupeocephala Bilateria Yes
Tni-Let-7-P2a3a tni-let-7g LET-7 GAGGUAG MIMAT0003098 None 9 3596162 3596232 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a4a tni-let-7e LET-7 GAGGUAG MIMAT0002899 None 9 4666605 4666677 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b2a tni-let-7b LET-7 GAGGUAG MIMAT0003017 None 19 5327500 5327575 - Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b3a tni-let-7h LET-7 GAGGUAG MIMAT0002893 None 9 3596439 3596519 + Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2b4a None LET-7 GAGGUAG None None 9 4666846 4666919 + Clupeocephala Bilateria Yes
Tni-Let-7-P2c2a None LET-7 GAGGUAG None None 19 5408223 5408295 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a2b tni-let-7a-2 LET-7 GAGGUAG MIMAT0002929 None 13 9220402 9220473 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a3b None LET-7 GAGGUAG None None 9 10380214 10380284 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a4b None LET-7 GAGGUAG None None 11 8661962 8662032 - Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b2b None LET-7 GAGGUAG None None 13 9220791 9220866 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b3b None LET-7 GAGGUAG None None 9 10380397 10380479 + Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2b4b tni-let-7a-3 LET-7 GAGGUAG MIMAT0002929 None 11 8661684 8661759 - Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2c2b tni-let-7i LET-7 GAGGUAG MIMAT0002978 None 13 9044991 9045067 - Clupeocephala Bilateria Yes 1
Tni-Mir-8160-P2 None MIR-8160 GAAUAAU None None Un_random 13327022 13327081 - Acanthomorpha Acanthomorpha Unknown
Tni-Novel-1 None TNI-NOVEL-1 CUCGCAG None None 1 14203636 14203691 - T. nigroviridis T. nigroviridis No 1
Tni-Novel-2 None TNI-NOVEL-2 CGGAACC None None 16 8126668 8126722 - T. nigroviridis T. nigroviridis No 1
Tni-Novel-3 None TNI-NOVEL-3 AGCUGUU None None 3 13094716 13094775 + T. nigroviridis T. nigroviridis No
Tni-Mir-460-P2a None MIR-460 CCUCAUU None None Un_random 54367914 54367972 + T. nigroviridis Osteichthyes Unknown 1
Tni-Mir-196-P4a1 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None None None None None T. nigroviridis Olfactores Unknown
Tni-Mir-196-P4a2 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None None None None None T. nigroviridis Olfactores Unknown
Tni-Mir-196-P4a3 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None None None None None T. nigroviridis Olfactores Unknown
Tni-Mir-460-P2b None MIR-460 CCUCAUU None None Un_random 36284986 36285045 + T. nigroviridis Osteichthyes Unknown 1

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